Format

Send to:

Choose Destination

Gpr20 G protein-coupled receptor 20 [ Mus musculus (house mouse) ]

Gene ID: 239530, updated on 18-Sep-2018

Summary

Official Symbol
Gpr20provided by MGI
Official Full Name
G protein-coupled receptor 20provided by MGI
Primary source
MGI:MGI:2441803
See related
Ensembl:ENSMUSG00000045281 Vega:OTTMUSG00000029052
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A430106B11Rik
Expression
Biased expression in colon adult (RPKM 7.9), duodenum adult (RPKM 2.4) and 5 other tissues See more
Orthologs

Genomic context

See Gpr20 in Genome Data Viewer
Location:
15; 15 D3
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 15 NC_000081.6 (73688497..73707505, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (73525037..73537935, complement)

Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene DENN/MADD domain containing 3 Neighboring gene solute carrier family 45, member 4 Neighboring gene protein tyrosine phosphatase 4a3 Neighboring gene maestro heat-like repeat family member 5 Neighboring gene NADH:ubiquinone oxidoreductase subunit B4C

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
G protein-coupled receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
receptor complex ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
G-protein coupled receptor 20
Names
G protein-coupled receptor GPR20

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173365.2NP_775541.1  G-protein coupled receptor 20

    See identical proteins and their annotated locations for NP_775541.1

    Status: PROVISIONAL

    Source sequence(s)
    AK040547
    Consensus CDS
    CCDS27518.1
    UniProtKB/Swiss-Prot
    Q8BYC4
    Related
    ENSMUSP00000063910.4, OTTMUSP00000037022, ENSMUST00000064166.4, OTTMUST00000072083
    Conserved Domains (1) summary
    pfam00001
    Location:69296
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000081.6 Reference GRCm38.p4 C57BL/6J

    Range
    73688497..73707505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006520927.2XP_006520990.1  G-protein coupled receptor 20 isoform X1

    See identical proteins and their annotated locations for XP_006520990.1

    UniProtKB/Swiss-Prot
    Q8BYC4
    Conserved Domains (1) summary
    pfam00001
    Location:69296
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Support Center