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Gpr68 G protein-coupled receptor 68 [ Mus musculus (house mouse) ]

Gene ID: 238377, updated on 14-Oct-2018

Summary

Official Symbol
Gpr68provided by MGI
Official Full Name
G protein-coupled receptor 68provided by MGI
Primary source
MGI:MGI:2441763
See related
Ensembl:ENSMUSG00000047415 Vega:OTTMUSG00000024497
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ogr1; BB131428
Expression
Broad expression in spleen adult (RPKM 5.7), thymus adult (RPKM 5.5) and 20 other tissues See more
Orthologs

Genomic context

See Gpr68 in Genome Data Viewer
Location:
12; 12 E
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (100876682..100908198, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (102114892..102146408, complement)

Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 40558 Neighboring gene D-glutamate cyclase Neighboring gene 60S ribosomal protein L29 pseudogene Neighboring gene predicted gene, 36572 Neighboring gene predicted gene, 45956 Neighboring gene coiled-coil domain containing 88C Neighboring gene RIKEN cDNA A630072L19 gene Neighboring gene predicted gene, 36756 Neighboring gene microRNA 1190

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ovarian cancer G-protein coupled receptor 1
Names
sphingosylphosphorylcholine receptor

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177673.1NP_001171144.1  ovarian cancer G-protein coupled receptor 1

    See identical proteins and their annotated locations for NP_001171144.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC126262, AI604270, AK036659, AK087410
    Consensus CDS
    CCDS26109.1
    UniProtKB/Swiss-Prot
    Q8BFQ3
    Related
    ENSMUSP00000105692.1, OTTMUSP00000029308, ENSMUST00000110065.7, OTTMUST00000060110
    Conserved Domains (2) summary
    pfam00001
    Location:58286
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35156
    7tm_4; Olfactory receptor
  2. NM_001177674.1NP_001171145.1  ovarian cancer G-protein coupled receptor 1

    See identical proteins and their annotated locations for NP_001171145.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC126262, AI604270, AK036659, BY206757, BY247743
    Consensus CDS
    CCDS26109.1
    UniProtKB/Swiss-Prot
    Q8BFQ3
    Related
    ENSMUSP00000057510.3, ENSMUST00000053668.9
    Conserved Domains (2) summary
    pfam00001
    Location:58286
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35156
    7tm_4; Olfactory receptor
  3. NM_175493.4NP_780702.1  ovarian cancer G-protein coupled receptor 1

    See identical proteins and their annotated locations for NP_780702.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC126262, AI604270, AK036659
    Consensus CDS
    CCDS26109.1
    UniProtKB/Swiss-Prot
    Q8BFQ3
    Related
    ENSMUSP00000105693.1, OTTMUSP00000029307, ENSMUST00000110066.7, OTTMUST00000060109
    Conserved Domains (2) summary
    pfam00001
    Location:58286
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35156
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

    Range
    100876682..100908198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315062.1XP_017170551.1  ovarian cancer G-protein coupled receptor 1 isoform X1

    Conserved Domains (2) summary
    pfam00001
    Location:68296
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:45166
    7tm_4; Olfactory receptor
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