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Lrrc37a leucine rich repeat containing 37A [ Mus musculus (house mouse) ]

Gene ID: 237954, updated on 2-Nov-2024

Summary

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Official Symbol
Lrrc37aprovided by MGI
Official Full Name
leucine rich repeat containing 37Aprovided by MGI
Primary source
MGI:MGI:2685097
See related
Ensembl:ENSMUSG00000078632 AllianceGenome:MGI:2685097
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm251
Summary
Orthologous to human LRRC37A2 (leucine rich repeat containing 37 member A2); LRRC37A3 (leucine rich repeat containing 37 member A3); and LRRC37A (leucine rich repeat containing 37A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 11.6) See more
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Genomic context

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See Lrrc37a in Genome Data Viewer
Location:
11 E1; 11 67.27 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (103341533..103395834, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (103450707..103505008, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family M (with RUN domain) member 1 Neighboring gene STARR-seq mESC enhancer starr_30848 Neighboring gene STARR-positive B cell enhancer ABC_E9376 Neighboring gene STARR-positive B cell enhancer ABC_E3027 Neighboring gene predicted gene, 39397 Neighboring gene STARR-seq mESC enhancer starr_30849 Neighboring gene STARR-seq mESC enhancer starr_30850 Neighboring gene STARR-seq mESC enhancer starr_30851 Neighboring gene STARR-seq mESC enhancer starr_30852 Neighboring gene leucine rich repeat containing 37 Neighboring gene STARR-seq mESC enhancer starr_30853 Neighboring gene STARR-seq mESC enhancer starr_30854 Neighboring gene STARR-seq mESC enhancer starr_30855 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene lysozyme-like 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
titin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    103341533..103395834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249376.2 → XP_011247678.1  titin-like

    UniProtKB/TrEMBL
    B1AWG4
    Related
    ENSMUSP00000121903.3, ENSMUST00000153273.3
    Conserved Domains (6) summary
    sd00031
    Location:2509 → 2531
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:2484 → 2507
    LRR_RI; leucine-rich repeat [structural motif]
    pfam05109
    Location:2169 → 2429
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13855
    Location:2509 → 2566
    LRR_8; Leucine rich repeat
    pfam14914
    Location:3153 → 3298
    LRRC37AB_C; LRRC37A/B like protein 1 C-terminal domain
    pfam15779
    Location:1390 → 1460
    LRRC37; Leucine-rich repeat-containing protein 37 family
Nucleotide Protein
Heading Accession and Version

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Chemical Information
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