WBP1 WW domain binding protein 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: WBP1provided by HGNC
Official Full Name: WW domain binding protein 1provided by HGNC
Primary source: HGNC:HGNC:12737
See related: Ensembl:ENSG00000239779 MIM:606961
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: WBP-1
Summary: The globular WW domain, named for the conserved tryptophan residues in the protein motif present in various structural and regulatory proteins, is known to play a role in the mediation of protein-protein interactions. This gene encodes a ligand of the WW domain of the Yes kinase-associated protein. Readthrough transcription of the neighboring upstream gene, which encodes INO80 complex subunit B, into this gene generates a non-coding transcript. [provided by RefSeq, Feb 2011]
Expression: Ubiquitous expression in thyroid (RPKM 48.7), prostate (RPKM 45.8) and 25 other tissues See more
Orthologs: mouse all

Genomic context

Location:: 2p13.1

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
109.20190905	current	GRCh38.p13 (GCF_000001405.39)	2	NC_000002.12 (74458438..74460881)
105	previous assembly	GRCh37.p13 (GCF_000001405.25)	2	NC_000002.11 (74684996..74688018)

Chromosome 2 - NC_000002.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

miR-21 inhibits cardiac fibroblasts proliferation by inactivating the TGF-beta1/Smad2 signaling pathway via up-regulation of WWP-1.
Title: MicroRNA-21 via Dysregulation of WW Domain-Containing Protein 1 Regulate Atrial Fibrosis in Atrial Fibrillation.
The WW1 and WW2 domains of YAP2 recognize various PPXY motifs within WBP1 and WBP2 in a highly promiscuous and subtle manner.
Title: Biophysical analysis of binding of WW domains of the YAP2 transcriptional regulator to PPXY motifs within WBP1 and WBP2 adaptors.
Mcl-1 is a determinant of cell fate, and ATF6 mediates apoptosis via specific suppression of Mcl-1 through up-regulation of WBP1
Title: Activating transcription factor-6 (ATF6) mediates apoptosis with reduction of myeloid cell leukemia sequence 1 (Mcl-1) protein via induction of WW domain binding protein 1.

Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

G54081 (e-PCR)
- UniSTS:109318

D6S304 (e-PCR), detects polymorphism
- UniSTS:12823

D2S1978 (e-PCR)
- UniSTS:37694

SHGC-31624 (e-PCR)
- UniSTS:4722

RH78317 (e-PCR)
- UniSTS:10122

WBP1 (e-PCR)
- UniSTS:279262

Readthrough INO80B-WBP1

Readthrough gene: INO80B-WBP1, Included gene: INO80B

Homology

Homologs of the WBP1 gene: The WBP1 gene is conserved in chimpanzee, Rhesus monkey, dog, cow, mouse, rat, and zebrafish.
Orthologs from Annotation Pipeline: 178 organisms have orthologs with human gene WBP1
Orthologs

Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
WW domain binding	IBA Inferred from Biological aspect of Ancestor more info	PubMed
WW domain binding	IPI Inferred from Physical Interaction more info	PubMed
WW domain binding	ISS Inferred from Sequence or Structural Similarity more info
protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: WW domain-binding protein 1

Names: epididymis secretory sperm binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.