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Slc38a7 solute carrier family 38, member 7 [ Mus musculus (house mouse) ]

Gene ID: 234595, updated on 12-Aug-2019

Summary

Official Symbol
Slc38a7provided by MGI
Official Full Name
solute carrier family 38, member 7provided by MGI
Primary source
MGI:MGI:2679005
See related
Ensembl:ENSMUSG00000036534
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D430050E18
Expression
Ubiquitous expression in placenta adult (RPKM 17.0), ovary adult (RPKM 10.8) and 28 other tissues See more
Orthologs

Genomic context

See Slc38a7 in Genome Data Viewer
Location:
8; 8 D1
Exon count:
13
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (95835920..95853577, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (98359823..98377391, complement)

Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene Sin3-associated polypeptide 18B Neighboring gene predicted gene, 31805 Neighboring gene glutamatic-oxaloacetic transaminase 2, mitochondrial Neighboring gene uncharacterized LOC115486957

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

Homology

Clone Names

  • MGC25764

Gene Ontology Provided by MGI

Function Evidence Code Pubs
L-alanine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-alanine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-asparagine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-asparagine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-aspartate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-aspartate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-glutamate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-glutamate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-glutamine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-glutamine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-histidine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-histidine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-leucine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-leucine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-methionine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-methionine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
L-serine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
L-serine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
amino acid transport IEA
Inferred from Electronic Annotation
more info
 
ion transport IEA
Inferred from Electronic Annotation
more info
 
sodium ion transport IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
axon IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
putative sodium-coupled neutral amino acid transporter 7
Names
amino acid transporter

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172758.4NP_766346.1  putative sodium-coupled neutral amino acid transporter 7

    See identical proteins and their annotated locations for NP_766346.1

    Status: PROVISIONAL

    Source sequence(s)
    AC127300
    Consensus CDS
    CCDS22567.1
    UniProtKB/Swiss-Prot
    Q8BWH0
    Related
    ENSMUSP00000037023.3, ENSMUST00000040481.3
    Conserved Domains (1) summary
    cl00456
    Location:49458
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000074.6 Reference GRCm38.p6 C57BL/6J

    Range
    95835920..95853577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530876.3XP_006530939.1  putative sodium-coupled neutral amino acid transporter 7 isoform X1

    See identical proteins and their annotated locations for XP_006530939.1

    UniProtKB/Swiss-Prot
    Q8BWH0
    Related
    ENSMUSP00000148659.1, ENSMUST00000212270.1
    Conserved Domains (1) summary
    cl00456
    Location:49458
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  2. XM_006530877.2XP_006530940.1  putative sodium-coupled neutral amino acid transporter 7 isoform X1

    See identical proteins and their annotated locations for XP_006530940.1

    UniProtKB/Swiss-Prot
    Q8BWH0
    Conserved Domains (1) summary
    cl00456
    Location:49458
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  3. XM_011248357.2XP_011246659.1  putative sodium-coupled neutral amino acid transporter 7 isoform X3

    Conserved Domains (1) summary
    cl00456
    Location:60316
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  4. XM_030243496.1XP_030099356.1  putative sodium-coupled neutral amino acid transporter 7 isoform X4

  5. XM_030243495.1XP_030099355.1  putative sodium-coupled neutral amino acid transporter 7 isoform X3

  6. XM_030243497.1XP_030099357.1  putative sodium-coupled neutral amino acid transporter 7 isoform X4

  7. XM_006530878.1XP_006530941.1  putative sodium-coupled neutral amino acid transporter 7 isoform X2

    Related
    ENSMUSP00000148545.1, ENSMUST00000212628.1
    Conserved Domains (1) summary
    cl00456
    Location:49339
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
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