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Ankrd26 ankyrin repeat domain 26 [ Mus musculus (house mouse) ]

Gene ID: 232339, updated on 11-Nov-2018

Summary

Official Symbol
Ankrd26provided by MGI
Official Full Name
ankyrin repeat domain 26provided by MGI
Primary source
MGI:MGI:1917887
See related
Ensembl:ENSMUSG00000007827 Vega:OTTMUSG00000048361
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BC008111; mKIAA1074; 5730521P14Rik
Expression
Broad expression in CNS E11.5 (RPKM 6.4), CNS E14 (RPKM 3.8) and 19 other tissues See more

Genomic context

See Ankrd26 in Genome Data Viewer
Location:
6; 6 F1
Exon count:
35
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (118501308..118562269, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (118452582..118512274, complement)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene zinc finger protein 248 pseudogene Neighboring gene zinc finger protein 9 Neighboring gene calcium channel, voltage-dependent, L type, alpha 1C subunit Neighboring gene predicted gene, 38887 Neighboring gene nuclear receptor subfamily 5, group A, member 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
colocalizes_with actin filament IDA
Inferred from Direct Assay
more info
PubMed 
centrosome ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 26

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081112.1NP_001074581.1  ankyrin repeat domain-containing protein 26

    Status: PROVISIONAL

    Source sequence(s)
    AC036121, AC140192
    Consensus CDS
    CCDS39609.1
    UniProtKB/TrEMBL
    D3Z482
    Related
    ENSMUSP00000108449.1, OTTMUSP00000067567, ENSMUST00000112830.2, OTTMUST00000124022
    Conserved Domains (8) summary
    COG1340
    Location:11971457
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd00204
    Location:75200
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:14951602
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:85177
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:51101
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:8861189
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:82111
    ANK; ANK repeat [structural motif]
    cl21509
    Location:11951329
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    118501308..118562269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506023.2XP_006506086.1  ankyrin repeat domain-containing protein 26 isoform X2

    Conserved Domains (8) summary
    COG1340
    Location:11641424
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd00187
    Location:11701316
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
    cd00204
    Location:75200
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:14621569
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:85177
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:51101
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:8531156
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:82111
    ANK; ANK repeat [structural motif]
  2. XM_006506022.2XP_006506085.1  ankyrin repeat domain-containing protein 26 isoform X1

    Conserved Domains (8) summary
    COG1340
    Location:12021462
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd00204
    Location:75200
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:15001607
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:85177
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:51101
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:8911194
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:82111
    ANK; ANK repeat [structural motif]
    cl21509
    Location:12001334
    ApoLp-III_like; Apolipophorin-III and similar insect proteins
  3. XM_006506025.3XP_006506088.1  ankyrin repeat domain-containing protein 26 isoform X4

    Conserved Domains (3) summary
    cd00187
    Location:720866
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
    pfam12001
    Location:10121119
    DUF3496; Domain of unknown function (DUF3496)
    pfam14915
    Location:403706
    CCDC144C; CCDC144C protein coiled-coil region
  4. XM_006506024.2XP_006506087.1  ankyrin repeat domain-containing protein 26 isoform X3

    Conserved Domains (5) summary
    cd00204
    Location:75200
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:85177
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:51101
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:8911194
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:82111
    ANK; ANK repeat [structural motif]

RNA

  1. XR_001785122.1 RNA Sequence

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