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Gpat3 glycerol-3-phosphate acyltransferase 3 [ Mus musculus (house mouse) ]

Gene ID: 231510, updated on 21-Apr-2024

Summary

Official Symbol
Gpat3provided by MGI
Official Full Name
glycerol-3-phosphate acyltransferase 3provided by MGI
Primary source
MGI:MGI:3603816
See related
Ensembl:ENSMUSG00000029314 AllianceGenome:MGI:3603816
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Agpat9; GPAT-3; mGPAT3; 1-AGPAT; AGPAT 10; 1-AGPAT 9; 4933408F15; 4933407I02Rik; A230097K15Rik
Summary
Enables glycerol-3-phosphate O-acyltransferase activity. Involved in glycerol-3-phosphate metabolic process; phospholipid biosynthetic process; and triglyceride biosynthetic process. Located in endoplasmic reticulum. Orthologous to human GPAT3 (glycerol-3-phosphate acyltransferase 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in subcutaneous fat pad adult (RPKM 11.7), large intestine adult (RPKM 11.5) and 17 other tissues See more
Orthologs
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Genomic context

Location:
5 E4; 5 48.52 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (100994095..101046968)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (100845665..100899102)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930458D05 gene Neighboring gene STARR-seq mESC enhancer starr_13731 Neighboring gene STARR-positive B cell enhancer mm9_chr5:101285611-101285912 Neighboring gene predicted gene, 26286 Neighboring gene STARR-seq mESC enhancer starr_13732 Neighboring gene STARR-positive B cell enhancer ABC_E2164 Neighboring gene predicted gene, 46917 Neighboring gene STARR-positive B cell enhancer ABC_E9257 Neighboring gene STARR-positive B cell enhancer ABC_E4769 Neighboring gene predicted gene, 36793 Neighboring gene predicted gene, 36740 Neighboring gene STARR-seq mESC enhancer starr_13733 Neighboring gene STARR-seq mESC enhancer starr_13734 Neighboring gene predicted gene, 36851

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables glycerol-3-phosphate O-acyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
glycerol-3-phosphate acyltransferase 3
Names
1-AGP acyltransferase 9
1-acyl-sn-glycerol-3-phosphate O-acyltransferase 10
1-acyl-sn-glycerol-3-phosphate O-acyltransferase 9
1-acylglycerol-3-phosphate O-acyltransferase 9
LPAAT-theta
acyl-CoA:glycerol-3-phosphate acyltransferase 3
lysophosphatidic acid acyltransferase theta
NP_766303.1
XP_011247735.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172715.3NP_766303.1  glycerol-3-phosphate acyltransferase 3

    See identical proteins and their annotated locations for NP_766303.1

    Status: VALIDATED

    Source sequence(s)
    AC107774, AI462140, AK160261, BY012233, CN719213
    Consensus CDS
    CCDS19470.1
    UniProtKB/Swiss-Prot
    A6H5X0, Q8C0N2
    Related
    ENSMUSP00000031255.9, ENSMUST00000031255.15
    Conserved Domains (1) summary
    cd07991
    Location:199408
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    100994095..101046968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249433.3XP_011247735.1  glycerol-3-phosphate acyltransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_011247735.1

    UniProtKB/Swiss-Prot
    A6H5X0, Q8C0N2
    Related
    ENSMUSP00000090667.4, ENSMUST00000092990.4
    Conserved Domains (1) summary
    cd07991
    Location:199408
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like