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CLASP2 cytoplasmic linker associated protein 2 [ Homo sapiens (human) ]

Gene ID: 23122, updated on 6-Nov-2022

Summary

Official Symbol
CLASP2provided by HGNC
Official Full Name
cytoplasmic linker associated protein 2provided by HGNC
Primary source
HGNC:HGNC:17078
See related
Ensembl:ENSG00000163539 MIM:605853; AllianceGenome:HGNC:17078
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Enables cytoskeletal protein binding activity; dystroglycan binding activity; and protein tyrosine kinase binding activity. Involved in several processes, including microtubule cytoskeleton organization; positive regulation of extracellular matrix organization; and regulation of supramolecular fiber organization. Located in several cellular components, including basal cortex; cortical microtubule plus-end; and ruffle membrane. Colocalizes with focal adhesion; kinetochore; and microtubule cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in brain (RPKM 43.5), adrenal (RPKM 10.5) and 22 other tissues See more
Orthologs
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Genomic context

See CLASP2 in Genome Data Viewer
Location:
3p22.3
Exon count:
47
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (33496245..33718254, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (33497978..33719132, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (33537737..33759746, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909363 Neighboring gene RNA, 5S ribosomal pseudogene 128 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 10 Neighboring gene PDCD6IP divergent transcript Neighboring gene SDA1 domain containing 1 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables dystroglycan binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables microtubule binding IDA
Inferred from Direct Assay
more info
PubMed 
enables microtubule plus-end binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of mitotic spindle localization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in establishment or maintenance of cell polarity TAS
Traceable Author Statement
more info
PubMed 
involved_in exit from mitosis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in microtubule anchoring IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in microtubule cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in microtubule nucleation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in microtubule organizing center organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitotic spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic spindle organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of focal adhesion assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of microtubule depolymerization NAS
Non-traceable Author Statement
more info
PubMed 
involved_in negative regulation of stress fiber assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of wound healing, spreading of epidermal cells IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of basement membrane assembly involved in embryonic body morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of epithelial cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of exocytosis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of extracellular matrix disassembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein localization to plasma membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of epithelial to mesenchymal transition IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of gastrulation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of microtubule polymerization or depolymerization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of microtubule-based process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vesicle targeting IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in basal cortex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in basal cortex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell cortex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell leading edge IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm NAS
Non-traceable Author Statement
more info
PubMed 
is_active_in cytoplasmic microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasmic microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
colocalizes_with focal adhesion IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with kinetochore IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in kinetochore microtubule TAS
Traceable Author Statement
more info
PubMed 
located_in membrane HDA PubMed 
colocalizes_with microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in microtubule organizing center IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
colocalizes_with mitotic spindle IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in ruffle membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in spindle microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in trans-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
CLIP-associating protein 2
Names
CLIP-associating protein CLASP2
multiple asters (Mast)-like homolog 2
protein Orbit homolog 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001207044.3NP_001193973.1  CLIP-associating protein 2 isoform 2

    See identical proteins and their annotated locations for NP_001193973.1

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Consensus CDS
    CCDS93234.1
    UniProtKB/Swiss-Prot
    O75122, Q9NSZ2
    Related
    ENSP00000417518.2, ENST00000480013.6
    Conserved Domains (2) summary
    sd00044
    Location:655682
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:94305
    CLASP_N; CLASP N terminal
  2. NM_001365627.1NP_001352556.1  CLIP-associating protein 2 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  3. NM_001365628.1NP_001352557.1  CLIP-associating protein 2 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  4. NM_001365629.1NP_001352558.1  CLIP-associating protein 2 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  5. NM_001365630.1NP_001352559.1  CLIP-associating protein 2 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  6. NM_001365631.1NP_001352560.1  CLIP-associating protein 2 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Consensus CDS
    CCDS93235.1
    UniProtKB/TrEMBL
    A0A804HJG7
    Related
    ENSP00000507498.1, ENST00000682230.1
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  7. NM_001365632.1NP_001352561.1  CLIP-associating protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  8. NM_001365633.1NP_001352562.1  CLIP-associating protein 2 isoform 9

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  9. NM_001365634.1NP_001352563.1  CLIP-associating protein 2 isoform 10

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  10. NM_001375694.1NP_001362623.1  CLIP-associating protein 2 isoform 11

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (4) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:326538
    CLASP_N; CLASP N terminal
    cl41918
    Location:671759
    CoV_N-NTD; N-terminal domain of nucleocapsid (N) protein of coronavirus
  11. NM_001375697.1NP_001362626.1  CLIP-associating protein 2 isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  12. NM_001375700.1NP_001362629.1  CLIP-associating protein 2 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (4) summary
    PHA03307
    Location:570786
    PHA03307; transcriptional regulator ICP4; Provisional
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  13. NM_001375701.1NP_001362630.1  CLIP-associating protein 2 isoform 14

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Consensus CDS
    CCDS93237.1
    UniProtKB/TrEMBL
    E7EW49
    Related
    ENSP00000419974.2, ENST00000468888.6
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  14. NM_001375703.1NP_001362632.1  CLIP-associating protein 2 isoform 16

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  15. NM_001375705.1NP_001362634.1  CLIP-associating protein 2 isoform 15

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (4) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:326538
    CLASP_N; CLASP N terminal
    cl41918
    Location:657745
    CoV_N-NTD; N-terminal domain of nucleocapsid (N) protein of coronavirus
  16. NM_001375713.1NP_001362642.1  CLIP-associating protein 2 isoform 17

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (3) summary
    sd00044
    Location:3258
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:6999
    HEAT; HEAT repeat
    pfam12348
    Location:228439
    CLASP_N; CLASP N terminal
  17. NM_001375715.1NP_001362644.1  CLIP-associating protein 2 isoform 18

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (2) summary
    sd00044
    Location:10591081
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:94305
    CLASP_N; CLASP N terminal
  18. NM_001375716.1NP_001362645.1  CLIP-associating protein 2 isoform 19

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (2) summary
    sd00044
    Location:641668
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:101312
    CLASP_N; CLASP N terminal
  19. NM_001375718.1NP_001362647.1  CLIP-associating protein 2 isoform 20

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Conserved Domains (2) summary
    sd00044
    Location:640667
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:100311
    CLASP_N; CLASP N terminal
  20. NM_001375720.1NP_001362649.1  CLIP-associating protein 2 isoform 21

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Related
    ENSP00000419305.3, ENST00000461133.8
    Conserved Domains (2) summary
    sd00044
    Location:634661
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:94305
    CLASP_N; CLASP N terminal
  21. NM_001400405.1NP_001387334.1  CLIP-associating protein 2 isoform 22

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  22. NM_001400406.1NP_001387335.1  CLIP-associating protein 2 isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  23. NM_001400407.1NP_001387336.1  CLIP-associating protein 2 isoform 24

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  24. NM_001400408.1NP_001387337.1  CLIP-associating protein 2 isoform 25

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  25. NM_001400409.1NP_001387338.1  CLIP-associating protein 2 isoform 26

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  26. NM_001400410.1NP_001387339.1  CLIP-associating protein 2 isoform 27

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  27. NM_001400411.1NP_001387340.1  CLIP-associating protein 2 isoform 28

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  28. NM_001400412.1NP_001387341.1  CLIP-associating protein 2 isoform 29

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  29. NM_001400413.1NP_001387342.1  CLIP-associating protein 2 isoform 30

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  30. NM_001400414.1NP_001387343.1  CLIP-associating protein 2 isoform 31

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Consensus CDS
    CCDS93232.1
    UniProtKB/TrEMBL
    A0A0U1RQI6
    Related
    ENSP00000489023.1, ENST00000635664.1
  31. NM_001400415.1NP_001387344.1  CLIP-associating protein 2 isoform 32

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  32. NM_001400416.1NP_001387345.1  CLIP-associating protein 2 isoform 33

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  33. NM_001400417.1NP_001387346.1  CLIP-associating protein 2 isoform 33

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  34. NM_001400418.1NP_001387347.1  CLIP-associating protein 2 isoform 34

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  35. NM_001400419.1NP_001387348.1  CLIP-associating protein 2 isoform 35

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  36. NM_001400420.1NP_001387349.1  CLIP-associating protein 2 isoform 36

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  37. NM_001400421.1NP_001387350.1  CLIP-associating protein 2 isoform 37

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  38. NM_001400422.1NP_001387351.1  CLIP-associating protein 2 isoform 38

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  39. NM_001400423.1NP_001387352.1  CLIP-associating protein 2 isoform 39

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  40. NM_001400424.1NP_001387353.1  CLIP-associating protein 2 isoform 40

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  41. NM_001400425.1NP_001387354.1  CLIP-associating protein 2 isoform 41

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    Consensus CDS
    CCDS93233.1
    UniProtKB/TrEMBL
    J3KR49
    Related
    ENSP00000498272.1, ENST00000650653.1
  42. NM_001400427.1NP_001387356.1  CLIP-associating protein 2 isoform 42

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  43. NM_001400428.1NP_001387357.1  CLIP-associating protein 2 isoform 43

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  44. NM_001400429.1NP_001387358.1  CLIP-associating protein 2 isoform 44

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  45. NM_001400430.1NP_001387359.1  CLIP-associating protein 2 isoform 45

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  46. NM_001400431.1NP_001387360.1  CLIP-associating protein 2 isoform 46

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  47. NM_001400432.1NP_001387361.1  CLIP-associating protein 2 isoform 47

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  48. NM_001400433.1NP_001387362.1  CLIP-associating protein 2 isoform 48

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  49. NM_001400434.1NP_001387363.1  CLIP-associating protein 2 isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  50. NM_001400435.1NP_001387364.1  CLIP-associating protein 2 isoform 50

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  51. NM_001400436.1NP_001387365.1  CLIP-associating protein 2 isoform 51

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  52. NM_001400437.1NP_001387366.1  CLIP-associating protein 2 isoform 52

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
  53. NM_015097.3NP_055912.2  CLIP-associating protein 2 isoform 1

    See identical proteins and their annotated locations for NP_055912.2

    Status: VALIDATED

    Source sequence(s)
    AC093114, AC113170, AC132515
    UniProtKB/Swiss-Prot
    O75122
    Conserved Domains (3) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    33496245..33718254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047447759.1XP_047303715.1  CLIP-associating protein 2 isoform X16

  2. XM_017005949.2XP_016861438.1  CLIP-associating protein 2 isoform X8

  3. XM_047447757.1XP_047303713.1  CLIP-associating protein 2 isoform X14

  4. XM_047447756.1XP_047303712.1  CLIP-associating protein 2 isoform X12

  5. XM_017005959.2XP_016861448.1  CLIP-associating protein 2 isoform X19

    UniProtKB/TrEMBL
    E7ERI8
    Related
    ENSP00000382297.4, ENST00000399362.8
  6. XM_006713052.2XP_006713115.1  CLIP-associating protein 2 isoform X17

    Conserved Domains (3) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  7. XM_017005948.2XP_016861437.1  CLIP-associating protein 2 isoform X6

  8. XM_006713041.2XP_006713104.1  CLIP-associating protein 2 isoform X4

    Conserved Domains (4) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam10265
    Location:686790
    DUF2217; Uncharacterized conserved protein (DUF2217)
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  9. XM_047447755.1XP_047303711.1  CLIP-associating protein 2 isoform X2

  10. XM_047447761.1XP_047303717.1  CLIP-associating protein 2 isoform X21

  11. XM_017005960.2XP_016861449.1  CLIP-associating protein 2 isoform X20

  12. XM_047447758.1XP_047303714.1  CLIP-associating protein 2 isoform X15

  13. XM_047447760.1XP_047303716.1  CLIP-associating protein 2 isoform X18

  14. XM_011533515.2XP_011531817.1  CLIP-associating protein 2 isoform X7

    Conserved Domains (4) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam10265
    Location:673777
    DUF2217; Uncharacterized conserved protein (DUF2217)
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  15. XM_017005957.2XP_016861446.1  CLIP-associating protein 2 isoform X13

  16. XM_006713053.2XP_006713116.1  CLIP-associating protein 2 isoform X22

    Conserved Domains (3) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  17. XM_006713050.2XP_006713113.1  CLIP-associating protein 2 isoform X11

    Conserved Domains (3) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  18. XM_006713048.2XP_006713111.1  CLIP-associating protein 2 isoform X9

    Conserved Domains (3) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  19. XM_017005956.2XP_016861445.1  CLIP-associating protein 2 isoform X10

  20. XM_006713042.2XP_006713105.1  CLIP-associating protein 2 isoform X5

    Conserved Domains (4) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam10265
    Location:687791
    DUF2217; Uncharacterized conserved protein (DUF2217)
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  21. XM_006713040.2XP_006713103.1  CLIP-associating protein 2 isoform X3

    Conserved Domains (4) summary
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam10265
    Location:687791
    DUF2217; Uncharacterized conserved protein (DUF2217)
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
  22. XM_047447754.1XP_047303710.1  CLIP-associating protein 2 isoform X1

  23. XM_047447764.1XP_047303720.1  CLIP-associating protein 2 isoform X28

  24. XM_017005972.3XP_016861461.1  CLIP-associating protein 2 isoform X25

  25. XM_047447763.1XP_047303719.1  CLIP-associating protein 2 isoform X27

  26. XM_047447762.1XP_047303718.1  CLIP-associating protein 2 isoform X26

  27. XM_017005969.3XP_016861458.1  CLIP-associating protein 2 isoform X24

  28. XM_017005968.3XP_016861457.1  CLIP-associating protein 2 isoform X23

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    33497978..33719132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)