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Eva1b eva-1 homolog B [ Mus musculus (house mouse) ]

Gene ID: 230752, updated on 21-Apr-2024

Summary

Official Symbol
Eva1bprovided by MGI
Official Full Name
eva-1 homolog Bprovided by MGI
Primary source
MGI:MGI:1922063
See related
Ensembl:ENSMUSG00000050212 AllianceGenome:MGI:1922063
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fam176b; 2610027C15Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in alimentary system; axial skeleton; embryo mesenchyme; trachea; and urinary system. Orthologous to human EVA1B (eva-1 homolog B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in ovary adult (RPKM 54.5), lung adult (RPKM 53.5) and 23 other tissues See more
Orthologs
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Genomic context

Location:
4 D2.2; 4 59.96 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (126039502..126043668)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (126145709..126149875)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2713 Neighboring gene U7 snRNP-specific Sm-like protein LSM10 Neighboring gene serine/threonine kinase 40 Neighboring gene SH3 domain containing 21 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:125839584-125839767 Neighboring gene STARR-seq mESC enhancer starr_11390 Neighboring gene thyroid hormone receptor associated protein 3 Neighboring gene STARR-seq mESC enhancer starr_11391 Neighboring gene STARR-seq mESC enhancer starr_11392 Neighboring gene predicted gene, 25323

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

General protein information

Preferred Names
protein eva-1 homolog B
Names
family with sequence similarity 176, member B
protein FAM176B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172145.3NP_742157.1  protein eva-1 homolog B

    See identical proteins and their annotated locations for NP_742157.1

    Status: PROVISIONAL

    Source sequence(s)
    AK076006
    Consensus CDS
    CCDS18643.1
    UniProtKB/Swiss-Prot
    B1AW02, Q8K2Y3
    Related
    ENSMUSP00000101758.3, ENSMUST00000106152.3
    Conserved Domains (1) summary
    pfam14851
    Location:7162
    FAM176; FAM176 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    126039502..126043668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503037.4XP_006503100.1  protein eva-1 homolog B isoform X1

    See identical proteins and their annotated locations for XP_006503100.1

    Conserved Domains (1) summary
    pfam14851
    Location:85214
    FAM176; FAM176 family
  2. XM_006503036.5XP_006503099.1  protein eva-1 homolog B isoform X1

    See identical proteins and their annotated locations for XP_006503099.1

    Conserved Domains (1) summary
    pfam14851
    Location:85214
    FAM176; FAM176 family
  3. XM_036164046.1XP_036019939.1  protein eva-1 homolog B isoform X2

    UniProtKB/Swiss-Prot
    B1AW02, Q8K2Y3
    Conserved Domains (1) summary
    pfam14851
    Location:7162
    FAM176; FAM176 family
  4. XM_006503040.5XP_006503103.1  protein eva-1 homolog B isoform X2

    See identical proteins and their annotated locations for XP_006503103.1

    UniProtKB/Swiss-Prot
    B1AW02, Q8K2Y3
    Conserved Domains (1) summary
    pfam14851
    Location:7162
    FAM176; FAM176 family
  5. XM_006503038.5XP_006503101.1  protein eva-1 homolog B isoform X2

    See identical proteins and their annotated locations for XP_006503101.1

    UniProtKB/Swiss-Prot
    B1AW02, Q8K2Y3
    Conserved Domains (1) summary
    pfam14851
    Location:7162
    FAM176; FAM176 family