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6330549D23Rik RIKEN cDNA 6330549D23 gene [ Mus musculus (house mouse) ]

Gene ID: 229613, updated on 8-Feb-2024


Official Symbol
6330549D23Rikprovided by MGI
Official Full Name
RIKEN cDNA 6330549D23 geneprovided by MGI
Primary source
See related
Ensembl:ENSMUSG00000121819 AllianceGenome:MGI:2442586
Gene type
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Ubiquitous expression in CNS E11.5 (RPKM 2.1), limb E14.5 (RPKM 1.5) and 28 other tissues See more
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Genomic context

See 6330549D23Rik in Genome Data Viewer
3 F2.1; 3 41.93 cM
Exon count:
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96513978..96537135, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96606662..96629819, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08441 Neighboring gene STARR-positive B cell enhancer ABC_E6083 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide G like Neighboring gene STARR-seq mESC enhancer starr_08442 Neighboring gene STARR-positive B cell enhancer ABC_E3451 Neighboring gene ankyrin repeat domain 34A Neighboring gene predicted gene, 52628 Neighboring gene Lix1-like Neighboring gene STARR-positive B cell enhancer ABC_E7929 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:96439383-96439492 Neighboring gene RNA binding motif protein 8a Neighboring gene peroxisomal biogenesis factor 11 beta

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.


  1. NR_003619.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000069.7 Reference GRCm39 C57BL/6J

    96513978..96537135 complement
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_175469.1: Suppressed sequence

    NM_175469.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.