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Uap1l1 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [ Mus musculus (house mouse) ]

Gene ID: 227620, updated on 25-May-2024

Summary

Official Symbol
Uap1l1provided by MGI
Official Full Name
UDP-N-acteylglucosamine pyrophosphorylase 1-like 1provided by MGI
Primary source
MGI:MGI:2443318
See related
Ensembl:ENSMUSG00000026956 AllianceGenome:MGI:2443318
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5730445F03Rik
Summary
Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Orthologous to human UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in placenta adult (RPKM 65.1), duodenum adult (RPKM 59.5) and 20 other tissues See more
Orthologs
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Genomic context

See Uap1l1 in Genome Data Viewer
Location:
2 A3; 2 17.19 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (25251501..25255695, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (25361489..25365682, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene dipeptidylpeptidase 7 Neighboring gene predicted gene, 46732 Neighboring gene STARR-positive B cell enhancer ABC_E9505 Neighboring gene suppressor APC domain containing 2 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Spontaneous (1)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
NP_001028465.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033293.3NP_001028465.1  UDP-N-acetylhexosamine pyrophosphorylase-like protein 1

    See identical proteins and their annotated locations for NP_001028465.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the protein-coding transcript.
    Source sequence(s)
    AK159787, AL732557, BE944661, BY096323
    Consensus CDS
    CCDS15767.1
    UniProtKB/Swiss-Prot
    A1L3D3, Q3TW96, Q6KAP8, Q6NVB6, Q80XP4
    UniProtKB/TrEMBL
    Q8BVK3
    Related
    ENSMUSP00000099989.4, ENSMUST00000102925.4
    Conserved Domains (1) summary
    cd04193
    Location:92413
    UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

RNA

  1. NR_149315.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK131159, BE944661, BY096323

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    25251501..25255695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004939546.1 RNA Sequence

  2. XR_374072.5 RNA Sequence