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Actr1b ARP1 actin-related protein 1B, centractin beta [ Mus musculus (house mouse) ]

Gene ID: 226977, updated on 3-Jun-2018
Official Symbol
Actr1bprovided by MGI
Official Full Name
ARP1 actin-related protein 1B, centractin betaprovided by MGI
Primary source
MGI:MGI:1917446
See related
Ensembl:ENSMUSG00000037351 Vega:OTTMUSG00000034164
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arp1b; AA960180; AI851923; 2310066K23Rik
Expression
Ubiquitous expression in cortex adult (RPKM 55.7), cerebellum adult (RPKM 47.4) and 28 other tissues See more
Orthologs
See Actr1b in Genome Data Viewer
Location:
1; 1 B
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (36699200..36710017, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (36756047..36766770, complement)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 178, member B Neighboring gene RIKEN cDNA 4933424G06 gene Neighboring gene cytochrome c oxidase subunit 5B Neighboring gene predicted gene, 33533 Neighboring gene predicted gene, 18828 Neighboring gene zeta-chain (TCR) associated protein kinase

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC36526

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
molecular_function ND
No biological Data available
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
centrosome ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
dynactin complex IEA
Inferred from Electronic Annotation
more info
 
microtubule cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
beta-centractin
Names
ARP1 actin-related protein 1 homolog B, centractin beta
actin-related protein 1B

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146107.2NP_666219.1  beta-centractin

    See identical proteins and their annotated locations for NP_666219.1

    Status: PROVISIONAL

    Source sequence(s)
    AC084389
    Consensus CDS
    CCDS14887.1
    UniProtKB/Swiss-Prot
    Q8R5C5
    Related
    ENSMUSP00000047326.3, OTTMUSP00000046893, ENSMUST00000043951.9, OTTMUST00000086602
    Conserved Domains (1) summary
    cl17037
    Location:5376
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

    Range
    36699200..36710017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011238485.2XP_011236787.1  beta-centractin isoform X2

    Conserved Domains (2) summary
    pfam00022
    Location:9332
    Actin; Actin
    cl17037
    Location:2332
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  2. XM_011238486.2XP_011236788.1  beta-centractin isoform X3

    Conserved Domains (2) summary
    pfam00022
    Location:1302
    Actin; Actin
    cl17037
    Location:1302
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  3. XM_011238484.1XP_011236786.1  beta-centractin isoform X1

    Conserved Domains (2) summary
    pfam00022
    Location:9334
    Actin; Actin
    cl17037
    Location:5334
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
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