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Hhat hedgehog acyltransferase [ Mus musculus (house mouse) ]

Gene ID: 226861, updated on 19-Apr-2019

Summary

Official Symbol
Hhatprovided by MGI
Official Full Name
hedgehog acyltransferaseprovided by MGI
Primary source
MGI:MGI:2444681
See related
Ensembl:ENSMUSG00000037375
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Skn; AP-2CRE; AI462858; 2810432O22Rik; Tg(TFAP2A-cre)1Will
Expression
Ubiquitous expression in ovary adult (RPKM 4.9), adrenal adult (RPKM 4.5) and 26 other tissues See more
Orthologs

Genomic context

See Hhat in Genome Data Viewer
Location:
1; 1 H6
Exon count:
15
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (192512828..192771219, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (194336710..194597413, complement)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39745 Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 1 Neighboring gene predicted gene, 31011 Neighboring gene RIKEN cDNA A730013G03 gene Neighboring gene predicted gene, 31078

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC11697

Gene Ontology Provided by MGI

Function Evidence Code Pubs
GTP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
palmitoyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
protein palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein palmitoylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
smoothened signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein-cysteine N-palmitoyltransferase HHAT
Names
skinny hedgehog protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_144881.4NP_659130.2  protein-cysteine N-palmitoyltransferase HHAT precursor

    See identical proteins and their annotated locations for NP_659130.2

    Status: VALIDATED

    Source sequence(s)
    AK028230, BY087228
    Consensus CDS
    CCDS15628.1
    UniProtKB/Swiss-Prot
    Q8BMT9
    Related
    ENSMUSP00000046686.5, ENSMUST00000044190.11
    Conserved Domains (1) summary
    pfam03062
    Location:152448
    MBOAT; MBOAT, membrane-bound O-acyltransferase family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

    Range
    192512828..192771219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011238934.2XP_011237236.1  protein-cysteine N-palmitoyltransferase HHAT isoform X1

    Conserved Domains (1) summary
    pfam03062
    Location:161457
    MBOAT; MBOAT, membrane-bound O-acyltransferase family
  2. XM_017320220.1XP_017175709.1  protein-cysteine N-palmitoyltransferase HHAT isoform X2

  3. XM_017320221.1XP_017175710.1  protein-cysteine N-palmitoyltransferase HHAT isoform X3

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