Fam78b family with sequence similarity 78, member B [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Fam78bprovided by MGI
Official Full Name: family with sequence similarity 78, member Bprovided by MGI
Primary source: MGI:MGI:2443050
See related: Ensembl:ENSMUSG00000060568 AllianceGenome:MGI:2443050
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: C030014K22Rik; C030020L09Rik
Summary: Orthologous to human FAM78B (family with sequence similarity 78 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Broad expression in whole brain E14.5 (RPKM 6.8), CNS E18 (RPKM 6.1) and 17 other tissues See more
Orthologs: human all
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Genomic context

Location:: 1; 1 H2.3

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
109	current	GRCm39 (GCF_000001635.27)	1	NC_000067.7 (166827456..166918871)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	1	NC_000067.6 (166999851..167091302)

Chromosome 1 - NC_000067.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Markers

D1Mit351 (e-PCR), detects polymorphism
- UniSTS:128710

Homology

Homologs of the Fam78b gene: The Fam78b gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, chicken, zebrafish, and frog.
Orthologs from Annotation Pipeline: 323 organisms have orthologs with human gene Fam78b
Orthologs

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: protein FAM78B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.