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Pgm5 phosphoglucomutase 5 [ Mus musculus (house mouse) ]

Gene ID: 226041, updated on 25-Sep-2020

Summary

Official Symbol
Pgm5provided by MGI
Official Full Name
phosphoglucomutase 5provided by MGI
Primary source
MGI:MGI:1925668
See related
Ensembl:ENSMUSG00000041731
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
aci; aciculin; 4833423B07; D830025G17; 9530034F03Rik
Expression
Biased expression in bladder adult (RPKM 105.7), colon adult (RPKM 13.9) and 6 other tissues See more
Orthologs

Genomic context

See Pgm5 in Genome Data Viewer
Location:
19; 19 B
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (24655625..24839206, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (24678261..24861842, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (24752751..24936332, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta Neighboring gene predicted gene, 52399 Neighboring gene predicted gene, 50341 Neighboring gene transmembrane protein 252 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 38581 Neighboring gene predicted gene, 52405 Neighboring gene cytochrome c, somatic pseudogene Neighboring gene forkhead box D4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
NOT intramolecular transferase activity, phosphotransferases IDA
Inferred from Direct Assay
more info
PubMed 
magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
NOT phosphoglucomutase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
NOT phosphoglucomutase activity ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
carbohydrate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell adhesion IEA
Inferred from Electronic Annotation
more info
 
glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 
myofibril assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
organic substance metabolic process IEA
Inferred from Electronic Annotation
more info
 
striated muscle tissue development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Z disc IDA
Inferred from Direct Assay
more info
PubMed 
adherens junction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
adherens junction ISO
Inferred from Sequence Orthology
more info
 
cell junction IEA
Inferred from Electronic Annotation
more info
 
cell-substrate junction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell-substrate junction IDA
Inferred from Direct Assay
more info
PubMed 
costamere ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
dystrophin-associated glycoprotein complex IDA
Inferred from Direct Assay
more info
PubMed 
focal adhesion ISO
Inferred from Sequence Orthology
more info
 
intercalated disc ISO
Inferred from Sequence Orthology
more info
 
sarcolemma IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sarcolemma IDA
Inferred from Direct Assay
more info
PubMed 
sarcolemma ISO
Inferred from Sequence Orthology
more info
 
spot adherens junction ISO
Inferred from Sequence Orthology
more info
 
stress fiber ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
phosphoglucomutase-like protein 5

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175013.2NP_778178.3  phosphoglucomutase-like protein 5

    See identical proteins and their annotated locations for NP_778178.3

    Status: VALIDATED

    Source sequence(s)
    AC151413, AK035507
    Consensus CDS
    CCDS29714.1
    UniProtKB/Swiss-Prot
    Q8BZF8
    Related
    ENSMUSP00000036025.4, ENSMUST00000047666.4
    Conserved Domains (1) summary
    cl03757
    Location:10567
    phosphohexomutase; The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    24655625..24839206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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