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Tmem44 transmembrane protein 44 [ Mus musculus (house mouse) ]

Gene ID: 224090, updated on 23-Jun-2021

Summary

Official Symbol
Tmem44provided by MGI
Official Full Name
transmembrane protein 44provided by MGI
Primary source
MGI:MGI:1924489
See related
Ensembl:ENSMUSG00000022537
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
B230220N21; 1700007N03Rik; 9330161C17Rik
Expression
Broad expression in CNS E18 (RPKM 16.0), whole brain E14.5 (RPKM 12.2) and 16 other tissues See more
Orthologs
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Genomic context

See Tmem44 in Genome Data Viewer
Location:
16; 16 B2
Exon count:
15
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (30330673..30369643, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (30511855..30550825, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (30511941..30550664, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene ATPase type 13A3 Neighboring gene glycoprotein 5 (platelet) Neighboring gene predicted gene, 52252 Neighboring gene predicted gene, 53946 Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene family with sequence similarity 43, member A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357413.1NP_001344342.1  transmembrane protein 44 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC104885
  2. NM_001357414.1NP_001344343.1  transmembrane protein 44 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC104885
  3. NM_001357415.1NP_001344344.1  transmembrane protein 44 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC104885
  4. NM_001361297.1NP_001348226.1  transmembrane protein 44 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AK048655, AK082652, BC059216, BC080307, CV562351
    Related
    ENSMUST00000144491.8
  5. NM_001384248.1NP_001371177.1  transmembrane protein 44

    Status: VALIDATED

    Source sequence(s)
    AC104885
  6. NM_001384249.1NP_001371178.1  transmembrane protein 44

    Status: VALIDATED

    Source sequence(s)
    AC104885
  7. NM_001384250.1NP_001371179.1  transmembrane protein 44

    Status: VALIDATED

    Source sequence(s)
    AC104885
  8. NM_001384251.1NP_001371180.1  transmembrane protein 44

    Status: VALIDATED

    Source sequence(s)
    AC104885
  9. NM_001384252.1NP_001371181.1  transmembrane protein 44

    Status: VALIDATED

    Source sequence(s)
    AC104885
  10. NM_172614.3NP_766202.3  transmembrane protein 44 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC104885, AK048655
    Consensus CDS
    CCDS37310.1
    UniProtKB/TrEMBL
    E9Q4M0, Q8C820
    Related
    ENSMUSP00000123494.2, ENSMUST00000140402.8

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    30330673..30369643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030249080.1XP_030104940.1  transmembrane protein 44 isoform X6

  2. XM_030249077.1XP_030104937.1  transmembrane protein 44 isoform X2

  3. XM_030249075.2XP_030104935.1  transmembrane protein 44 isoform X1

  4. XM_036159894.1XP_036015787.1  transmembrane protein 44 isoform X7

  5. XM_030249079.2XP_030104939.1  transmembrane protein 44 isoform X5

  6. XM_030249078.2XP_030104938.1  transmembrane protein 44 isoform X4

  7. XM_036159893.1XP_036015786.1  transmembrane protein 44 isoform X3

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