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Uxt ubiquitously expressed prefoldin like chaperone [ Mus musculus (house mouse) ]

Gene ID: 22294, updated on 2-Oct-2018

Summary

Official Symbol
Uxtprovided by MGI
Official Full Name
ubiquitously expressed prefoldin like chaperoneprovided by MGI
Primary source
MGI:MGI:1277988
See related
Ensembl:ENSMUSG00000001134 Vega:OTTMUSG00000017183
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
0910002B17Rik
Expression
Ubiquitous expression in large intestine adult (RPKM 6.6), kidney adult (RPKM 6.5) and 28 other tissues See more
Orthologs

Genomic context

See Uxt in Genome Data Viewer
Location:
X; X A1.3
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (20951665..20962034, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (20528791..20539104, complement)

Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene complement factor properdin Neighboring gene ELK1, member of ETS oncogene family Neighboring gene RIKEN cDNA A230072C01 gene Neighboring gene zinc finger protein 182 Neighboring gene sperm acrosome associated 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
beta-tubulin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
beta-tubulin binding ISO
Inferred from Sequence Orthology
more info
 
beta-tubulin binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
chromatin binding ISO
Inferred from Sequence Orthology
more info
 
transcription corepressor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
apoptotic process IEA
Inferred from Electronic Annotation
more info
 
centrosome cycle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
centrosome cycle ISO
Inferred from Sequence Orthology
more info
 
centrosome cycle ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
microtubule cytoskeleton organization ISO
Inferred from Sequence Orthology
more info
 
microtubule cytoskeleton organization ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
negative regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
centrosome ISO
Inferred from Sequence Orthology
more info
 
centrosome ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
colocalizes_with gamma-tubulin complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
colocalizes_with gamma-tubulin complex ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with gamma-tubulin complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
protein UXT
Names
ubiquitously expressed transcript protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013840.3NP_038868.2  protein UXT

    See identical proteins and their annotated locations for NP_038868.2

    Status: PROVISIONAL

    Source sequence(s)
    AK027917
    Consensus CDS
    CCDS30049.1
    UniProtKB/Swiss-Prot
    Q9WTZ0
    Related
    ENSMUSP00000115342.1, OTTMUSP00000018690, ENSMUST00000123836.1, OTTMUST00000041610
    Conserved Domains (1) summary
    cd00584
    Location:18147
    Prefoldin_alpha; Prefoldin alpha subunit; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

    Range
    20951665..20962034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017318462.1XP_017173951.1  protein UXT isoform X1

    Conserved Domains (1) summary
    cd00584
    Location:18133
    Prefoldin_alpha; Prefoldin alpha subunit; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta ...
  2. XM_006527602.3XP_006527665.1  protein UXT isoform X2

    Conserved Domains (1) summary
    cl09111
    Location:18111
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
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