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NKAPL NFKB activating protein like [ Homo sapiens (human) ]

Gene ID: 222698, updated on 2-Oct-2018

Summary

Official Symbol
NKAPLprovided by HGNC
Official Full Name
NFKB activating protein likeprovided by HGNC
Primary source
HGNC:HGNC:21584
See related
Ensembl:ENSG00000189134 Vega:OTTHUMG00000014517
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C6orf194; bA424I5.1
Orthologs

Genomic context

See NKAPL in Genome Data Viewer
Location:
6p22.1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 6 NC_000006.12 (28259297..28260958)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28227075..28228736)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domain containing 9 Neighboring gene zinc finger with KRAB and SCAN domains 4 Neighboring gene zinc finger and SCAN domain containing 26 Neighboring gene piggyBac transposable element derived 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Genome-wide association study identifies a susceptibility locus for schizophrenia in Han Chinese at 11p11.2.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC126730, MGC126734

Gene Ontology Provided by GOA

Function Evidence Code Pubs
chromatin binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007531.2NP_001007532.1  NKAP-like protein

    Status: VALIDATED

    Source sequence(s)
    AI240405, BC038240, BC101681, DB471905
    Consensus CDS
    CCDS34353.1
    UniProtKB/Swiss-Prot
    Q5M9Q1
    Related
    ENSP00000345716.3, OTTHUMP00000016201, ENST00000343684.3, OTTHUMT00000040185
    Conserved Domains (2) summary
    pfam06047
    Location:293394
    SynMuv_product; Ras-induced vulval development antagonizt
    pfam15692
    Location:112158
    NKAP; NF-kappa-B-activating protein

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p12 Primary Assembly

    Range
    28259297..28260958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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