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Ugt8a UDP galactosyltransferase 8A [ Mus musculus (house mouse) ]

Gene ID: 22239, updated on 3-Oct-2020

Summary

Official Symbol
Ugt8aprovided by MGI
Official Full Name
UDP galactosyltransferase 8Aprovided by MGI
Primary source
MGI:MGI:109522
See related
Ensembl:ENSMUSG00000032854
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cgt; Ugt8; mCerG; mCerGT; AI850488; AW455908
Expression
Biased expression in cerebellum adult (RPKM 18.2), cortex adult (RPKM 10.8) and 3 other tissues See more
Orthologs

Genomic context

See Ugt8a in Genome Data Viewer
Location:
3; 3 G1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (125655071..125732301, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (125865272..125938682, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (125568261..125641468, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 Neighboring gene predicted gene, 35237 Neighboring gene predicted gene, 35186 Neighboring gene predicted gene, 40145 Neighboring gene predicted gene, 40146 Neighboring gene family with sequence similarity 98, member B pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
N-acylsphingosine galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
UDP-glycosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ceramide glucosyltransferase activity TAS
Traceable Author Statement
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring glycosyl groups IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring hexosyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
glycolipid biosynthetic process TAS
Traceable Author Statement
more info
PubMed 
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
myelination TAS
Traceable Author Statement
more info
PubMed 
neuron projection morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
paranodal junction assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein localization to paranode region of axon IMP
Inferred from Mutant Phenotype
more info
PubMed 
sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase
Names
UDP-galactose-ceramide galactosyltransferase 8A
UDP-glucuronosyltransferase 8
ceramide UDP-galactosyltransferase
cerebroside synthase
NP_035804.2
XP_006501373.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011674.5NP_035804.2  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform 1 precursor

    See identical proteins and their annotated locations for NP_035804.2

    Status: VALIDATED

    Source sequence(s)
    AC111106, AK137364, AK144005
    Consensus CDS
    CCDS17821.1
    UniProtKB/Swiss-Prot
    Q64676
    Related
    ENSMUSP00000050852.7, ENSMUST00000057944.11
    Conserved Domains (1) summary
    pfam00201
    Location:21502
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

RNA

  1. NR_149311.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC111106

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    125655071..125732301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006501310.5XP_006501373.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_006501373.1

    UniProtKB/Swiss-Prot
    Q64676
    Conserved Domains (1) summary
    pfam00201
    Location:21502
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
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