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HNRNPUL2 heterogeneous nuclear ribonucleoprotein U like 2 [ Homo sapiens (human) ]

Gene ID: 221092, updated on 5-Jul-2020

Summary

Official Symbol
HNRNPUL2provided by HGNC
Official Full Name
heterogeneous nuclear ribonucleoprotein U like 2provided by HGNC
Primary source
HGNC:HGNC:25451
See related
Ensembl:ENSG00000214753
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SAF-A2; HNRPUL2
Expression
Ubiquitous expression in brain (RPKM 35.1), colon (RPKM 29.9) and 25 other tissues See more
Orthologs

Genomic context

See HNRNPUL2 in Genome Data Viewer
Location:
11q12.3
Exon count:
14
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (62712630..62727457, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (62480097..62494857, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene HNRNPUL2-BSCL2 readthrough (NMD candidate) Neighboring gene LRRN4 C-terminal like Neighboring gene BSCL2 lipid droplet biogenesis associated, seipin Neighboring gene G protein subunit gamma 3 Neighboring gene tetratricopeptide repeat domain 9C Neighboring gene zinc finger and BTB domain containing 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Readthrough HNRNPUL2-BSCL2

Readthrough gene: HNRNPUL2-BSCL2, Included gene: BSCL2

Homology

Clone Names

  • DKFZp762N1910

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
membrane HDA PubMed 
nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
heterogeneous nuclear ribonucleoprotein U-like protein 2
Names
scaffold-attachment factor A2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079559.3NP_001073027.1  heterogeneous nuclear ribonucleoprotein U-like protein 2

    See identical proteins and their annotated locations for NP_001073027.1

    Status: VALIDATED

    Source sequence(s)
    AP001160, AP001458, BC029105, DQ470474
    Consensus CDS
    CCDS41659.1
    UniProtKB/Swiss-Prot
    Q1KMD3
    Related
    ENSP00000301785.5, ENST00000301785.7
    Conserved Domains (4) summary
    smart00513
    Location:337
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    pfam13671
    Location:454599
    AAA_33; AAA domain
    cd12884
    Location:246417
    SPRY_hnRNP; SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1
    cl17190
    Location:454636
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    62712630..62727457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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