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LRRN4CL LRRN4 C-terminal like [ Homo sapiens (human) ]

Gene ID: 221091, updated on 23-Nov-2021

Summary

Official Symbol
LRRN4CLprovided by HGNC
Official Full Name
LRRN4 C-terminal likeprovided by HGNC
Primary source
HGNC:HGNC:33724
See related
Ensembl:ENSG00000177363
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in ovary (RPKM 6.0), endometrium (RPKM 5.9) and 17 other tissues See more
Orthologs
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Genomic context

See LRRN4CL in Genome Data Viewer
Location:
11q12.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (62686406..62689530, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (62453878..62457002, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene LBH domain containing 1 Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 3 Neighboring gene UBX domain protein 1 Neighboring gene HNRNPUL2-BSCL2 readthrough (NMD candidate) Neighboring gene BSCL2 lipid droplet biogenesis associated, seipin Neighboring gene G protein subunit gamma 3 Neighboring gene heterogeneous nuclear ribonucleoprotein U like 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC61707

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
LRRN4 C-terminal-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033077.1 RefSeqGene

    Range
    5370..8494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_203422.4NP_981967.1  LRRN4 C-terminal-like protein precursor

    See identical proteins and their annotated locations for NP_981967.1

    Status: VALIDATED

    Source sequence(s)
    AL834319, AP001458
    Consensus CDS
    CCDS8030.1
    UniProtKB/Swiss-Prot
    Q8ND94
    Related
    ENSP00000325808.4, ENST00000317449.5
    Conserved Domains (1) summary
    cd00063
    Location:83162
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    62686406..62689530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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