U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

REEP3 receptor accessory protein 3 [ Homo sapiens (human) ]

Gene ID: 221035, updated on 8-Jan-2023

Summary

Official Symbol
REEP3provided by HGNC
Official Full Name
receptor accessory protein 3provided by HGNC
Primary source
HGNC:HGNC:23711
See related
Ensembl:ENSG00000165476 MIM:609348; AllianceGenome:HGNC:23711
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Yip2b; C10orf74
Summary
Predicted to enable microtubule binding activity. Involved in mitotic nuclear membrane reassembly. Predicted to be integral component of membrane. Predicted to be active in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in fat (RPKM 7.0), small intestine (RPKM 6.5) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See REEP3 in Genome Data Viewer
Location:
10q21.3
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (63521401..63625128)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (64379547..64483523)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (65281161..65384888)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 1C Neighboring gene JMJD1C antisense RNA 2 Neighboring gene JMJD1C antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 5662 Neighboring gene uncharacterized LOC105378329 Neighboring gene uncharacterized LOC107984238 Neighboring gene uncharacterized LOC101929846 Neighboring gene mitochondrial ribosomal protein L35 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects.
EBI GWAS Catalog
Common genetic variants associated with cognitive performance identified using the proxy-phenotype method.
EBI GWAS Catalog
Genome-wide association analysis of juvenile idiopathic arthritis identifies a new susceptibility locus at chromosomal region 3q13.
EBI GWAS Catalog
Genome-wide association study identifies a new locus JMJD1C at 10q21 that may influence serum androgen levels in men.
EBI GWAS Catalog
Genome-wide association study of plasma N6 polyunsaturated fatty acids within the cohorts for heart and aging research in genomic epidemiology consortium.
EBI GWAS Catalog
Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC87479

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in endoplasmic reticulum tubular network organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic nuclear membrane reassembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nuclear envelope organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasmic microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in endoplasmic reticulum tubular network IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
receptor expression-enhancing protein 3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001330.3NP_001001330.1  receptor expression-enhancing protein 3

    See identical proteins and their annotated locations for NP_001001330.1

    Status: VALIDATED

    Source sequence(s)
    AC022387, BC068557
    Consensus CDS
    CCDS44411.1
    UniProtKB/Swiss-Prot
    Q6NUK4, Q6PJY4
    UniProtKB/TrEMBL
    X5DR89
    Related
    ENSP00000362863.4, ENST00000373758.5
    Conserved Domains (1) summary
    pfam03134
    Location:1995
    TB2_DP1_HVA22; TB2/DP1, HVA22 family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    63521401..63625128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011539501.3XP_011537803.1  receptor expression-enhancing protein 3 isoform X1

    See identical proteins and their annotated locations for XP_011537803.1

    UniProtKB/TrEMBL
    X5DP57
    Conserved Domains (1) summary
    pfam03134
    Location:794
    TB2_DP1_HVA22; TB2/DP1, HVA22 family
  2. XM_017015896.2XP_016871385.1  receptor expression-enhancing protein 3 isoform X1

    UniProtKB/TrEMBL
    X5DP57
    Conserved Domains (1) summary
    pfam03134
    Location:794
    TB2_DP1_HVA22; TB2/DP1, HVA22 family

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    64379547..64483523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)