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OAF out at first homolog [ Homo sapiens (human) ]

Gene ID: 220323, updated on 1-Jun-2020

Summary

Official Symbol
OAFprovided by HGNC
Official Full Name
out at first homologprovided by HGNC
Primary source
HGNC:HGNC:28752
See related
Ensembl:ENSG00000184232
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NS5ATP13TP2
Expression
Ubiquitous expression in liver (RPKM 56.8), colon (RPKM 31.5) and 24 other tissues See more
Orthologs

Genomic context

See OAF in Genome Data Viewer
Location:
11q23.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (120211032..120230334)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (120081747..120100650)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984399 Neighboring gene uncharacterized LOC105369530 Neighboring gene HNF4 motif-containing MPRA enhancer 139 Neighboring gene POU class 2 homeobox 3 Neighboring gene Sharpr-MPRA regulatory region 564 Neighboring gene uncharacterized LOC649133 Neighboring gene uncharacterized LOC105369531

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC52117

General protein information

Preferred Names
out at first protein homolog
Names
HCV NS5A-transactivated protein 13 target protein 2
OAF homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178507.4NP_848602.1  out at first protein homolog precursor

    See identical proteins and their annotated locations for NP_848602.1

    Status: VALIDATED

    Source sequence(s)
    AA902624, AI733095, AP000679, BC047726, DB480792
    Consensus CDS
    CCDS8430.1
    UniProtKB/Swiss-Prot
    Q86UD1
    Related
    ENSP00000332613.3, ENST00000328965.9
    Conserved Domains (1) summary
    pfam14941
    Location:31268
    OAF; Transcriptional regulator, Out at first

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    120211032..120230334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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