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ERICH6B glutamate rich 6B [ Homo sapiens (human) ]

Gene ID: 220081, updated on 23-Nov-2021

Summary

Official Symbol
ERICH6Bprovided by HGNC
Official Full Name
glutamate rich 6Bprovided by HGNC
Primary source
HGNC:HGNC:26523
See related
Ensembl:ENSG00000165837
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM194B
Expression
Restricted expression toward testis (RPKM 1.6) See more
Orthologs
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Genomic context

See ERICH6B in Genome Data Viewer
Location:
13q14.13
Exon count:
15
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (45541203..45615739, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (46115429..46189874, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A pseudogene 25 Neighboring gene component of oligomeric golgi complex 3 Neighboring gene RNA, 5S ribosomal pseudogene 27 Neighboring gene TIMM9 pseudogene 3 Neighboring gene cytochrome c oxidase subunit 4I1 pseudogene 2 Neighboring gene long intergenic non-protein coding RNA 1055 Neighboring gene aldo-keto reductase family 1 member B1 pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

HIV-1 interactions

Replication interactions

Interaction Pubs
Knockdown of family with sequence similarity 194, member B (FAM194B) by siRNA inhibits HIV-1 replication in HeLa P4/R5 cells PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ32682

General protein information

Preferred Names
glutamate-rich protein 6B
Names
family with sequence similarity 194, member B
protein FAM194B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_182542.3NP_872348.2  glutamate-rich protein 6B

    See identical proteins and their annotated locations for NP_872348.2

    Status: VALIDATED

    Source sequence(s)
    AL139326
    Consensus CDS
    CCDS45045.1
    UniProtKB/Swiss-Prot
    Q5W0A0
    Related
    ENSP00000298738.2, ENST00000298738.3
    Conserved Domains (1) summary
    pfam14977
    Location:472666
    FAM194; FAM194 protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    45541203..45615739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017020418.1XP_016875907.1  glutamate-rich protein 6B isoform X2

    UniProtKB/Swiss-Prot
    Q5W0A0
    Conserved Domains (1) summary
    pfam14977
    Location:472666
    FAM194; FAM194 protein
  2. XM_011534965.2XP_011533267.1  glutamate-rich protein 6B isoform X1

    See identical proteins and their annotated locations for XP_011533267.1

    Conserved Domains (1) summary
    pfam14977
    Location:472690
    FAM194; FAM194 protein
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