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TEX47 testis expressed 47 [ Homo sapiens (human) ]

Gene ID: 219557, updated on 23-Nov-2021

Summary

Official Symbol
TEX47provided by HGNC
Official Full Name
testis expressed 47provided by HGNC
Primary source
HGNC:HGNC:22402
See related
Ensembl:ENSG00000164645
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C7orf62
Expression
Restricted expression toward testis (RPKM 4.5) See more
Orthologs
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Genomic context

See TEX47 in Genome Data Viewer
Location:
7q21.13
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (88794106..88797937, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (88423420..88425051, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 28 Neighboring gene uncharacterized LOC107986816 Neighboring gene zinc finger protein 804B Neighboring gene uncharacterized LOC105375387 Neighboring gene uncharacterized LOC107986817

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Novel associations for hypothyroidism include known autoimmune risk loci.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC26647

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
testis-expressed protein 47
Names
uncharacterized protein C7orf62

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152706.4NP_689919.1  testis-expressed protein 47

    See identical proteins and their annotated locations for NP_689919.1

    Status: VALIDATED

    Source sequence(s)
    AC002127, BC028365
    Consensus CDS
    CCDS34678.1
    UniProtKB/Swiss-Prot
    Q8TBZ9
    Related
    ENSP00000297203.2, ENST00000297203.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    88794106..88797937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011515904.2XP_011514206.1  testis-expressed protein 47 isoform X1

    See identical proteins and their annotated locations for XP_011514206.1

    UniProtKB/Swiss-Prot
    Q8TBZ9
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