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BC006965 cDNA sequence BC006965 [ Mus musculus (house mouse) ]

Gene ID: 217294, updated on 26-Sep-2022


Official Symbol
BC006965provided by MGI
Official Full Name
cDNA sequence BC006965provided by MGI
Primary source
See related
Ensembl:ENSMUSG00000041674 AllianceGenome:MGI:2384955
Gene type
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Is expressed in alimentary system; central nervous system; sensory organ; and skeleton. [provided by Alliance of Genome Resources, Apr 2022]
Biased expression in limb E14.5 (RPKM 2.2), mammary gland adult (RPKM 0.7) and 7 other tissues See more
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Genomic context

See BC006965 in Genome Data Viewer
11; 11 E2
Exon count:
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (112554753..112602182, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (112663927..112711356, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene Sox9 enhancer E250 Neighboring gene Sox9 enhancer E195 Neighboring gene Sox9 enhancer E84 Neighboring gene Sox9 enhancer SOM Neighboring gene Sox9 testis enhancer TES Neighboring gene Sox9 promoter region Neighboring gene SRY (sex determining region Y)-box 9

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Clone Names

  • MGC6956, MGC6983

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.


  1. NR_024085.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000077.7 Reference GRCm39 C57BL/6J

    112554753..112602182 complement
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_146031.1: Suppressed sequence

    NM_146031.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.