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Gm525 predicted gene 525 [ Mus musculus (house mouse) ]

Gene ID: 217071, updated on 8-Nov-2022

Summary

Official Symbol
Gm525provided by MGI
Official Full Name
predicted gene 525provided by MGI
Primary source
MGI:MGI:2685371
See related
Ensembl:ENSMUSG00000072553 AllianceGenome:MGI:2685371
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be located in extracellular region. Orthologous to human C17orf67 (chromosome 17 open reading frame 67). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in thymus adult (RPKM 8.5), testis adult (RPKM 5.5) and 6 other tissues See more
Orthologs
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Genomic context

See Gm525 in Genome Data Viewer
Location:
11; 11 C
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (88957346..88983890)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (89073841..89093064)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 11496 Neighboring gene tripartite motif-containing 25 Neighboring gene diacylglycerol kinase, epsilon Neighboring gene diacylglycerol kinase, epsilon, opposite strand Neighboring gene predicted gene, 22534 Neighboring gene predicted gene, 38759 Neighboring gene noggin

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C17orf67 homolog
Names
novel transcript

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033266.2NP_001028438.1  uncharacterized protein C17orf67 homolog precursor

    See identical proteins and their annotated locations for NP_001028438.1

    Status: VALIDATED

    Source sequence(s)
    AA237157, AW823710
    Consensus CDS
    CCDS36279.1
    UniProtKB/Swiss-Prot
    B2KGT0, Q3V3I5
    UniProtKB/TrEMBL
    A0A8C6N561
    Related
    ENSMUSP00000098184.5, ENSMUST00000100619.11
    Conserved Domains (1) summary
    pfam15076
    Location:1890
    DUF4543; Domain of unknown function (DUF4543)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    88957346..88983890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156587.1XP_036012480.1  uncharacterized protein C17orf67 homolog isoform X1

    UniProtKB/Swiss-Prot
    B2KGT0
    UniProtKB/TrEMBL
    A0A8C6N561
    Conserved Domains (1) summary
    pfam15076
    Location:1890
    DUF4543; Domain of unknown function (DUF4543)