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Tcte2 t-complex-associated testis expressed 2 [ Mus musculus (house mouse) ]

Gene ID: 21646, updated on 24-Sep-2025
Official Symbol
Tcte2provided by MGI
Official Full Name
t-complex-associated testis expressed 2provided by MGI
Primary source
MGI:MGI:98641
See related
Ensembl:ENSMUSG00000038347 AllianceGenome:MGI:98641
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tcte-2
Summary
Is expressed in central nervous system; neural retina; pancreas; and testis. [provided by Alliance of Genome Resources, Jul 2025]
Expression
Biased expression in testis adult (RPKM 96.4) and lung adult (RPKM 1.7) See more
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See Tcte2 in Genome Data Viewer
Location:
17 A1; 17 8.9 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (13936698..13981665, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (13716436..13761403, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41530 Neighboring gene STARR-seq mESC enhancer starr_41878 Neighboring gene predicted gene, 24867 Neighboring gene afadin, adherens junction formation factor Neighboring gene STARR-seq mESC enhancer starr_41882 Neighboring gene STARR-seq mESC enhancer starr_41883 Neighboring gene STARR-seq mESC enhancer starr_41885 Neighboring gene predicted gene 7168 Neighboring gene predicted gene, 33889

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (1) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_177952.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC174800
    Related
    ENSMUST00000130033.9
  2. NR_177953.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC174800

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    13936698..13981665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_022311.3: Suppressed sequence

    Description
    NM_022311.3: This RefSeq was removed because currently there is support for the transcript but not for the protein.