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Zmat1 zinc finger, matrin type 1 [ Mus musculus (house mouse) ]

Gene ID: 215693, updated on 26-Sep-2022


Official Symbol
Zmat1provided by MGI
Official Full Name
zinc finger, matrin type 1provided by MGI
Primary source
See related
Ensembl:ENSMUSG00000052676 AllianceGenome:MGI:2442284
Gene type
protein coding
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A230096A06; B930008K04Rik
Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be located in nucleus. Orthologous to human ZMAT1 (zinc finger matrin-type 1). [provided by Alliance of Genome Resources, Apr 2022]
Ubiquitous expression in frontal lobe adult (RPKM 2.0), cerebellum adult (RPKM 1.5) and 28 other tissues See more
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Genomic context

See Zmat1 in Genome Data Viewer
X; X F1
Exon count:
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (133872121..133909958, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (134971372..135009209, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene developmental pluripotency associated 2 pseudogene Neighboring gene nuclear RNA export factor 2 Neighboring gene RIKEN cDNA 3632454L22 gene Neighboring gene preferentially expressed antigen in melanoma-like 3 pseudogene

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a



Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 


Products Interactant Other Gene Complex Source Pubs Description

General gene information



Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info

General protein information

Preferred Names
zinc finger matrin-type protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175446.3NP_780655.2  zinc finger matrin-type protein 1

    See identical proteins and their annotated locations for NP_780655.2

    Status: VALIDATED

    Source sequence(s)
    AL361464, AW044958, BC067022
    Consensus CDS
    ENSMUSP00000066815.6, ENSMUST00000064659.6

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000086.8 Reference GRCm39 C57BL/6J

    133872121..133909958 complement
    GenBank, FASTA, Sequence Viewer (Graphics)