Format

Send to:

Choose Destination

Tmem120a transmembrane protein 120A [ Mus musculus (house mouse) ]

Gene ID: 215210, updated on 12-Aug-2019

Summary

Official Symbol
Tmem120aprovided by MGI
Official Full Name
transmembrane protein 120Aprovided by MGI
Primary source
MGI:MGI:2686991
See related
Ensembl:ENSMUSG00000039886
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tmpit; 2010310D06Rik
Expression
Broad expression in duodenum adult (RPKM 93.9), subcutaneous fat pad adult (RPKM 83.5) and 23 other tissues See more
Orthologs

Genomic context

See Tmem120a in Genome Data Viewer
Location:
5; 5 G2
Exon count:
12
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (135735490..135744172, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (136211360..136220042, complement)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene P450 (cytochrome) oxidoreductase Neighboring gene predicted gene, 40345 Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene microRNA 7034 Neighboring gene serine/threonine/tyrosine interacting-like 1 Neighboring gene uncharacterized LOC105244798 Neighboring gene malate dehydrogenase 2, NAD (mitochondrial)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
fat cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
fat cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
fat cell differentiation ISO
Inferred from Sequence Orthology
more info
 
protein heterooligomerization IDA
Inferred from Direct Assay
more info
PubMed 
protein heterooligomerization ISO
Inferred from Sequence Orthology
more info
 
protein homooligomerization IDA
Inferred from Direct Assay
more info
PubMed 
protein homooligomerization ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane protein 120A
Names
transmembrane protein induced by tumor necrosis factor alpha

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172541.2NP_766129.1  transmembrane protein 120A

    See identical proteins and their annotated locations for NP_766129.1

    Status: PROVISIONAL

    Source sequence(s)
    AK028119
    Consensus CDS
    CCDS19744.1
    UniProtKB/Swiss-Prot
    Q8C1E7
    Related
    ENSMUSP00000045252.2, ENSMUST00000043378.8
    Conserved Domains (1) summary
    pfam07851
    Location:13336
    TMPIT; TMPIT-like protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p6 C57BL/6J

    Range
    135735490..135744172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center