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Ankrd35 ankyrin repeat domain 35 [ Mus musculus (house mouse) ]

Gene ID: 213121, updated on 24-Oct-2019

Summary

Official Symbol
Ankrd35provided by MGI
Official Full Name
ankyrin repeat domain 35provided by MGI
Primary source
MGI:MGI:2442590
See related
Ensembl:ENSMUSG00000038354
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4732436F15Rik
Expression
Broad expression in bladder adult (RPKM 2.9), cerebellum adult (RPKM 1.9) and 21 other tissues See more
Orthologs

Genomic context

See Ankrd35 in Genome Data Viewer
Location:
3; 3 F2.1
Exon count:
14
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96670131..96691034)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (96474054..96494957)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene integrin, alpha 10 Neighboring gene ribosomal protein L21, pseudogene 11 Neighboring gene protein inhibitor of activated STAT 3 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 17 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide C Neighboring gene predicted gene, 22581

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 35

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081139.1NP_001074608.1  ankyrin repeat domain-containing protein 35 isoform 1

    See identical proteins and their annotated locations for NP_001074608.1

    Status: VALIDATED

    Source sequence(s)
    AC112261
    Consensus CDS
    CCDS38558.1
    UniProtKB/TrEMBL
    E9Q9D8
    Related
    ENSMUSP00000047244.5, ENSMUST00000048427.8
    Conserved Domains (4) summary
    cd00204
    Location:81206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:5384
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190251
    Ank_2; Ankyrin repeats (3 copies)
    cl25732
    Location:710996
    SMC_N; RecF/RecN/SMC N terminal domain
  2. NM_001356538.1NP_001343467.1  ankyrin repeat domain-containing protein 35 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC112261
    Consensus CDS
    CCDS38558.1
    Conserved Domains (4) summary
    cd00204
    Location:81206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:5384
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:190251
    Ank_2; Ankyrin repeats (3 copies)
    cl25732
    Location:710996
    SMC_N; RecF/RecN/SMC N terminal domain
  3. NM_001356539.1NP_001343468.1  ankyrin repeat domain-containing protein 35 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC112261
    Conserved Domains (5) summary
    cd00204
    Location:30155
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:3566
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:139200
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:743
    Ank_5; Ankyrin repeats (many copies)
    cl25732
    Location:659945
    SMC_N; RecF/RecN/SMC N terminal domain
  4. NM_001356540.1NP_001343469.1  ankyrin repeat domain-containing protein 35 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC112261, AK046624
    Conserved Domains (5) summary
    cd00204
    Location:30155
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:3566
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:139200
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:743
    Ank_5; Ankyrin repeats (many copies)
    cl25732
    Location:659945
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p6 C57BL/6J

    Range
    96670131..96691034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017319516.1XP_017175005.1  ankyrin repeat domain-containing protein 35 isoform X1

    Conserved Domains (5) summary
    cd00204
    Location:30155
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:3566
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:139200
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:743
    Ank_5; Ankyrin repeats (many copies)
    cl25732
    Location:659945
    SMC_N; RecF/RecN/SMC N terminal domain
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