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Spopfm1 speckle-type BTB/POZ protein family member 1 [ Mus musculus (house mouse) ]

Gene ID: 212727, updated on 24-Sep-2025
Official Symbol
Spopfm1provided by MGI
Official Full Name
speckle-type BTB/POZ protein family member 1provided by MGI
Primary source
MGI:MGI:3643869
See related
AllianceGenome:MGI:3643869
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4778; EG212727
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See Spopfm1 in Genome Data Viewer
Location:
3 F2.1; 3 40.51 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (94171343..94174483)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (94264036..94267176)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene TD and POZ domain containing 3 pseudogene Neighboring gene TD and POZ domain containing 2 pseudogene Neighboring gene predicted gene, 36010 Neighboring gene STARR-seq mESC enhancer starr_08345 Neighboring gene STARR-positive B cell enhancer mm9_chr3:94113993-94114294 Neighboring gene thioesterase superfamily member 4 Neighboring gene predicted gene, 52664

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Other Names

  • TD and POZ domain containing pseudogene

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012545.1 

    Range
    101..3241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    94171343..94174483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.