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Zfp781a zinc finger protein 781A [ Mus musculus (house mouse) ]

Gene ID: 211135, updated on 8-Feb-2025

Summary

Official Symbol
Zfp781aprovided by MGI
Official Full Name
zinc finger protein 781Aprovided by MGI
Primary source
MGI:MGI:2444324
See related
Ensembl:ENSMUSG00000079038 AllianceGenome:MGI:2444324
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D130040H23Rik
Summary
Orthologous to human ZNF781 (zinc finger protein 781). [provided by Alliance of Genome Resources, Feb 2025]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Zfp781a in Genome Data Viewer
Location:
8 B3.3; 8 33.88 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (69723714..69776105)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (69271060..69303384)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 930 Neighboring gene predicted gene, 33178 Neighboring gene membrane-associated ring finger (C3HC4) 5 pseudogene Neighboring gene STARR-seq mESC enhancer starr_21726 Neighboring gene STARR-positive B cell enhancer ABC_E2263 Neighboring gene STARR-seq mESC enhancer starr_21728 Neighboring gene STARR-seq mESC enhancer starr_21730 Neighboring gene STARR-positive B cell enhancer mm9_chr8:71852567-71852867 Neighboring gene eukaryotic translation initiation factor 1 pseudogene Neighboring gene predicted gene 10033

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC211135

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001384124.1NP_001371053.1  uncharacterized protein LOC211135 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AC117621
    Related
    ENSMUSP00000148399.2, ENSMUST00000212549.2
    Conserved Domains (4) summary
    COG5048
    Location:131326
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:149169
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1960
    KRAB; KRAB box
    pfam13465
    Location:385410
    zf-H2C2_2; Zinc-finger double domain
  2. NM_172491.3NP_766079.1  uncharacterized protein LOC211135 isoform 2

    See identical proteins and their annotated locations for NP_766079.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate exon, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1.
    Source sequence(s)
    AC117621
    Consensus CDS
    CCDS52565.1
    UniProtKB/TrEMBL
    Q8BII3
    Related
    ENSMUSP00000077378.7, ENSMUST00000078257.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    69723714..69776105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004934788.1 RNA Sequence