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Rbmx2 RNA binding motif protein, X-linked 2 [ Mus musculus (house mouse) ]

Gene ID: 209003, updated on 25-Sep-2020

Summary

Official Symbol
Rbmx2provided by MGI
Official Full Name
RNA binding motif protein, X-linked 2provided by MGI
Primary source
MGI:MGI:1919414
See related
Ensembl:ENSMUSG00000031107
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CGI-7; CGI-79; 2700089A17Rik; 2810411A03Rik
Expression
Broad expression in CNS E11.5 (RPKM 8.2), liver E14 (RPKM 7.3) and 19 other tissues See more
Orthologs

Genomic context

See Rbmx2 in Genome Data Viewer
Location:
X; X A5
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (47783881..47799596)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (48695004..48710719)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (46048181..46063896)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 (mitochondrial carrier, brain), member 14 Neighboring gene G-protein coupled receptor 119 Neighboring gene hyaluronic acid binding protein 4 pseudogene Neighboring gene fibrous sheath-interacting protein 2-like

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
RNA splicing IEA
Inferred from Electronic Annotation
more info
 
mRNA processing IEA
Inferred from Electronic Annotation
more info
 
mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mRNA splicing, via spliceosome ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
U2 snRNP IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
U2-type precatalytic spliceosome ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
precatalytic spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
RNA-binding motif protein, X-linked 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173376.3NP_775552.1  RNA-binding motif protein, X-linked 2

    See identical proteins and their annotated locations for NP_775552.1

    Status: PROVISIONAL

    Source sequence(s)
    AL672042
    Consensus CDS
    CCDS30114.1
    UniProtKB/Swiss-Prot
    Q8R0F5
    Related
    ENSMUSP00000033433.2, ENSMUST00000033433.2
    Conserved Domains (2) summary
    COG0724
    Location:38110
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12411
    Location:27115
    RRM_ist3_like; RNA recognition motif in ist3 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    47783881..47799596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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