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Srprb signal recognition particle receptor, B subunit [ Mus musculus (house mouse) ]

Gene ID: 20818, updated on 12-Aug-2019

Summary

Official Symbol
Srprbprovided by MGI
Official Full Name
signal recognition particle receptor, B subunitprovided by MGI
Primary source
MGI:MGI:102964
See related
Ensembl:ENSMUSG00000032553
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AA409543
Expression
Ubiquitous expression in adrenal adult (RPKM 31.7), placenta adult (RPKM 31.4) and 28 other tissues See more
Orthologs

Genomic context

See Srprb in Genome Data Viewer
Location:
9; 9 F1
Exon count:
7
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (103188033..103202065, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (103090363..103104395, complement)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115487137 Neighboring gene predicted gene, 46128 Neighboring gene RAB6B, member RAS oncogene family Neighboring gene transferrin Neighboring gene RIKEN cDNA 1300017J02 gene Neighboring gene predicted gene, 31701

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 

Pathways from BioSystems

  • Protein export, organism-specific biosystem (from KEGG)
    Protein export, organism-specific biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
  • Protein export, conserved biosystem (from KEGG)
    Protein export, conserved biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
GTP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
signal recognition particle receptor subunit beta
Names
SR-beta

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009275.4NP_033301.1  signal recognition particle receptor subunit beta

    See identical proteins and their annotated locations for NP_033301.1

    Status: PROVISIONAL

    Source sequence(s)
    AK030437
    Consensus CDS
    CCDS23450.1
    UniProtKB/Swiss-Prot
    P47758
    Related
    ENSMUSP00000035157.8, ENSMUST00000035157.9
    Conserved Domains (2) summary
    cd04105
    Location:63268
    SR_beta; Signal recognition particle receptor, beta subunit (SR-beta), together with SR-alpha, forms the heterodimeric signal recognition particle (SRP)
    pfam09439
    Location:60239
    SRPRB; Signal recognition particle receptor beta subunit

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p6 C57BL/6J

    Range
    103188033..103202065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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