Format

Send to:

Choose Destination

SFTA1P surfactant associated 1, lncRNA [ Homo sapiens (human) ]

Gene ID: 207107, updated on 23-Nov-2021

Summary

Official Symbol
SFTA1Pprovided by HGNC
Official Full Name
surfactant associated 1, lncRNAprovided by HGNC
Primary source
HGNC:HGNC:18383
See related
Ensembl:ENSG00000225383
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SFTPF
Expression
Biased expression in lung (RPKM 34.1) and fat (RPKM 4.4) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SFTA1P in Genome Data Viewer
Location:
10p14
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (10784439..10794914, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (10826402..10836877, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984207 Neighboring gene CELF2 divergent transript Neighboring gene CUGBP Elav-like family member 2 Neighboring gene uncharacterized LOC105376405 Neighboring gene long intergenic non-protein coding RNA 710

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
GWAS of dental caries patterns in the permanent dentition.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • surfactant associated 1, pseudogene
  • surfactant associated protein F

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027082.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AY102069
    Related
    ENST00000446372.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    10784439..10794914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center