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PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 206426, updated on 13-May-2022

Summary

Official Symbol
PIP5K1P1provided by HGNC
Official Full Name
phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:28372
See related
AllianceGenome:HGNC:28372
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See PIP5K1P1 in Genome Data Viewer
Location:
6p24.3
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (7986102..7990344)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (7854858..7859100)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (7986335..7990577)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374906 Neighboring gene Sharpr-MPRA regulatory region 4297 Neighboring gene bone morphogenetic protein 6 Neighboring gene BLOC1S5-TXNDC5 readthrough (NMD candidate) Neighboring gene thioredoxin domain containing 5 Neighboring gene EEF1E1-BLOC1S5 readthrough (NMD candidate) Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5 Neighboring gene eukaryotic translation elongation factor 1 epsilon 1 Neighboring gene small Cajal body-specific RNA 27

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • PIP5K1A pseudogene
  • phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1

Clone Names

  • MGC26597

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027712.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL096800

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    7986102..7990344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    7854858..7859100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004717.2: Suppressed sequence

    Description
    NG_004717.2: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  2. NG_025895.1: Suppressed sequence

    Description
    NG_025895.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  3. NM_152700.2: Suppressed sequence

    Description
    NM_152700.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.