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C6orf163 chromosome 6 open reading frame 163 [ Homo sapiens (human) ]

Gene ID: 206412, updated on 1-Jun-2020

Summary

Official Symbol
C6orf163provided by HGNC
Official Full Name
chromosome 6 open reading frame 163provided by HGNC
Primary source
HGNC:HGNC:21403
See related
Ensembl:ENSG00000203872
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See C6orf163 in Genome Data Viewer
Location:
6q15
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (87344813..87365463)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (88054571..88075381)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene gap junction protein beta 7 Neighboring gene heat shock protein family D (Hsp60) member 1 pseudogene 10 Neighboring gene tigger transposable element derived 6 pseudogene Neighboring gene small integral membrane protein 8 Neighboring gene long intergenic non-protein coding RNA 1590 Neighboring gene cilia and flagella associated protein 206 Neighboring gene TATA-box binding protein associated factor 13 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C6orf163

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010868.3NP_001010868.2  uncharacterized protein C6orf163

    See identical proteins and their annotated locations for NP_001010868.2

    Status: VALIDATED

    Source sequence(s)
    AL096817
    Consensus CDS
    CCDS55042.1
    UniProtKB/Swiss-Prot
    Q5TEZ5
    Related
    ENSP00000373575.3, ENST00000388923.5
    Conserved Domains (1) summary
    COG5281
    Location:58291
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    87344813..87365463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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