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C2orf69 chromosome 2 open reading frame 69 [ Homo sapiens (human) ]

Gene ID: 205327, updated on 5-Aug-2018

Summary

Official Symbol
C2orf69provided by HGNC
Official Full Name
chromosome 2 open reading frame 69provided by HGNC
Primary source
HGNC:HGNC:26799
See related
Ensembl:ENSG00000178074 Vega:OTTHUMG00000154480
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 10.2), brain (RPKM 9.5) and 25 other tissues See more
Orthologs

Genomic context

See C2orf69 in Genome Data Viewer
Location:
2q33.1
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 2 NC_000002.12 (199911256..199928273)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (200775979..200792996)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene formiminotransferase cyclodeaminase N-terminal like Neighboring gene uncharacterized LOC101927687 Neighboring gene RNA, 7SL, cytoplasmic 717, pseudogene Neighboring gene tRNA-yW synthesizing protein 5 Neighboring gene matrix AAA peptidase interacting protein 1 Neighboring gene uncharacterized LOC105373833

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ38973

Gene Ontology Provided by GOA

Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153689.5NP_710156.3  UPF0565 protein C2orf69 precursor

    See identical proteins and their annotated locations for NP_710156.3

    Status: VALIDATED

    Source sequence(s)
    AC097717, AK096292, BC036456, DA773166
    Consensus CDS
    CCDS46482.1
    UniProtKB/Swiss-Prot
    Q8N8R5
    Related
    ENSP00000312770.5, OTTHUMP00000205792, ENST00000319974.5, OTTHUMT00000335446
    Conserved Domains (1) summary
    pfam10561
    Location:56361
    UPF0565; Uncharacterized protein family UPF0565

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p12 Primary Assembly

    Range
    199911256..199928273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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