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CT83 cancer/testis antigen 83 [ Homo sapiens (human) ]

Gene ID: 203413, updated on 14-Oct-2019

Summary

Official Symbol
CT83provided by HGNC
Official Full Name
cancer/testis antigen 83provided by HGNC
Primary source
HGNC:HGNC:33494
See related
Ensembl:ENSG00000204019 MIM:300625
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KKLC1; CXorf61; KK-LC-1
Expression
Restricted expression toward testis (RPKM 15.4) See more
Orthologs

Genomic context

See CT83 in Genome Data Viewer
Location:
Xq23
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (116461686..116462976, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (115592853..115594194, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 154, pseudogene Neighboring gene solute carrier family 6 member 14 Neighboring gene SLC6A14 pseudogene 1 Neighboring gene SLC6A14 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Homology

Clone Names

  • FLJ20611, FLJ22913

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nucleus HDA PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
kita-kyushu lung cancer antigen 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017978.4NP_001017978.1  kita-kyushu lung cancer antigen 1

    See identical proteins and their annotated locations for NP_001017978.1

    Status: VALIDATED

    Source sequence(s)
    AC241580, AK026566
    Consensus CDS
    CCDS35372.1
    UniProtKB/Swiss-Prot
    Q5H943
    Related
    ENSP00000360961.4, ENST00000371894.5
    Conserved Domains (1) summary
    pfam15204
    Location:25109
    KKLCAg1; Kita-kyushu lung cancer antigen 1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    116461686..116462976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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