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LINC00504 long intergenic non-protein coding RNA 504 [ Homo sapiens (human) ]

Gene ID: 201853, updated on 25-Jan-2022

Summary

Official Symbol
LINC00504provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 504provided by HGNC
Primary source
HGNC:HGNC:43555
See related
Ensembl:ENSG00000248360 AllianceGenome:HGNC:43555
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00504 in Genome Data Viewer
Location:
4p15.33
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (14470465..14888169, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (14472089..14889793, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 1402 Neighboring gene VISTA enhancer hs842 Neighboring gene uncharacterized LOC105374496 Neighboring gene MT-ND2 pseudogene 31 Neighboring gene uncharacterized LOC105374498 Neighboring gene CPEB2 divergent transcript Neighboring gene C1QTNF7 antisense RNA 1 Neighboring gene cytoplasmic polyadenylation element binding protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126435.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC093777, AC093846, AC134620
    Related
    ENST00000505089.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    14470465..14888169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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