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TEX37 testis expressed 37 [ Homo sapiens (human) ]

Gene ID: 200523, updated on 23-Nov-2021

Summary

Official Symbol
TEX37provided by HGNC
Official Full Name
testis expressed 37provided by HGNC
Primary source
HGNC:HGNC:26341
See related
Ensembl:ENSG00000172073
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TSC21; C2orf51
Expression
Restricted expression toward testis (RPKM 20.4) See more
Orthologs
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Genomic context

See TEX37 in Genome Data Viewer
Location:
2p11.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (88524619..88529585)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (88824167..88829103)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene RPL38 pseudogene 6 Neighboring gene forkhead box I3 Neighboring gene uncharacterized LOC101928371 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 3 Neighboring gene EIF2AK3 divergent transcript

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ25369

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
testis-expressed sequence 37 protein
Names
Testis-Specific Conserved gene 21kDa
protein TSC21
testis tissue sperm-binding protein Li 93mP
testis-specific conserved protein of 21 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152670.3NP_689883.1  testis-expressed sequence 37 protein

    See identical proteins and their annotated locations for NP_689883.1

    Status: VALIDATED

    Source sequence(s)
    AC104134, AK058098, AW104588
    Consensus CDS
    CCDS2003.1
    UniProtKB/Swiss-Prot
    Q96LM6
    UniProtKB/TrEMBL
    A0A140VK60
    Related
    ENSP00000307142.3, ENST00000303254.4
    Conserved Domains (1) summary
    pfam15217
    Location:1180
    TSC21; TSC21 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    88524619..88529585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011532692.2XP_011530994.1  testis-expressed sequence 37 protein isoform X1

    See identical proteins and their annotated locations for XP_011530994.1

    UniProtKB/Swiss-Prot
    Q96LM6
    UniProtKB/TrEMBL
    A0A140VK60
    Conserved Domains (1) summary
    pfam15217
    Location:1180
    TSC21; TSC21 family
  2. XM_005264188.3XP_005264245.3  testis-expressed sequence 37 protein isoform X1

    UniProtKB/Swiss-Prot
    Q96LM6
    UniProtKB/TrEMBL
    A0A140VK60
    Conserved Domains (1) summary
    pfam15217
    Location:1180
    TSC21; TSC21 family
  3. XM_011532691.1XP_011530993.1  testis-expressed sequence 37 protein isoform X1

    See identical proteins and their annotated locations for XP_011530993.1

    UniProtKB/Swiss-Prot
    Q96LM6
    UniProtKB/TrEMBL
    A0A140VK60
    Conserved Domains (1) summary
    pfam15217
    Location:1180
    TSC21; TSC21 family
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