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NBPF11 NBPF member 11 [ Homo sapiens (human) ]

Gene ID: 200030, updated on 11-Jun-2021

Summary

Official Symbol
NBPF11provided by HGNC
Official Full Name
NBPF member 11provided by HGNC
Primary source
HGNC:HGNC:31993
See related
Ensembl:ENSG00000263956 MIM:614001
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NBPF24
Expression
Ubiquitous expression in skin (RPKM 15.7), ovary (RPKM 14.5) and 25 other tissues See more
Orthologs
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Genomic context

See NBPF11 in Genome Data Viewer
Location:
1q21.2
Exon count:
27
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (148102151..148152281, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147574428..147624560, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tRNA-Asn (anticodon GTT) 9-2 Neighboring gene PDE4DIP pseudogene 1 Neighboring gene profilin 1 pseudogene 4 Neighboring gene ABHD17A pseudogene 1 Neighboring gene uncharacterized LOC105371227 Neighboring gene long intergenic non-protein coding RNA 2805

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ61663, DKFZp451B1418

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
neuroblastoma breakpoint family member 11
Names
neuroblastoma breakpoint family, member 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101663.5NP_001095133.3  neuroblastoma breakpoint family member 11 isoform b

    See identical proteins and their annotated locations for NP_001095133.3

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q86T75
    Related
    ENSP00000484213.1, ENST00000614015.4
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  2. NM_001385468.3NP_001372397.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  3. NM_001385469.3NP_001372398.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENSP00000507808.1, ENST00000682118.1
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  4. NM_001385470.3NP_001372399.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  5. NM_001385471.1NP_001372400.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  6. NM_001385472.1NP_001372401.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  7. NM_001385473.1NP_001372402.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  8. NM_001385474.1NP_001372403.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  9. NM_001385475.1NP_001372404.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  10. NM_001385476.1NP_001372405.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  11. NM_001385477.1NP_001372406.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENSP00000479429.1, ENST00000614785.4
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  12. NM_001385478.1NP_001372407.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  13. NM_001385479.1NP_001372408.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  14. NM_001385480.1NP_001372409.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENSP00000477874.1, ENST00000613531.1
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  15. NM_183372.9NP_899228.5  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENSP00000477509.1, ENST00000615281.4
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)

RNA

  1. NR_046188.5 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
  2. NR_110864.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENST00000614506.4
  3. NR_169628.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
  4. NR_169629.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    148102151..148152281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024453858.1XP_024309626.1  neuroblastoma breakpoint family member 11 isoform X1

    Conserved Domains (2) summary
    pfam06758
    Location:736801
    DUF1220; Repeat of unknown function (DUF1220)
    cl25732
    Location:65455
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_024453859.1XP_024309627.1  neuroblastoma breakpoint family member 11 isoform X2

    Conserved Domains (2) summary
    pfam06758
    Location:505565
    DUF1220; Repeat of unknown function (DUF1220)
    cl26511
    Location:107527
    Neuromodulin_N; Gap junction protein N-terminal region

RNA

  1. XR_002959669.1 RNA Sequence

  2. XR_002959662.1 RNA Sequence

  3. XR_002959670.1 RNA Sequence

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