U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NBPF11 NBPF member 11 [ Homo sapiens (human) ]

Gene ID: 200030, updated on 26-Oct-2022

Summary

Official Symbol
NBPF11provided by HGNC
Official Full Name
NBPF member 11provided by HGNC
Primary source
HGNC:HGNC:31993
See related
Ensembl:ENSG00000263956 MIM:614001; AllianceGenome:HGNC:31993
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NBPF24
Summary
Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in skin (RPKM 15.7), ovary (RPKM 14.5) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See NBPF11 in Genome Data Viewer
Location:
1q21.2
Exon count:
27
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148102151..148152281, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146655132..146705256)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147574428..147624560, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tRNA-Asn (anticodon GTT) 9-2 Neighboring gene PDE4DIP pseudogene 1 Neighboring gene profilin 1 pseudogene 4 Neighboring gene ABHD17A pseudogene 1 Neighboring gene uncharacterized LOC105371227 Neighboring gene long intergenic non-protein coding RNA 2805

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ61663, DKFZp451B1418

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
neuroblastoma breakpoint family member 11
Names
neuroblastoma breakpoint family, member 24

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101663.5NP_001095133.3  neuroblastoma breakpoint family member 11 isoform b

    See identical proteins and their annotated locations for NP_001095133.3

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0, Q86T75
    Related
    ENSP00000484213.1, ENST00000614015.4
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  2. NM_001385468.3NP_001372397.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  3. NM_001385469.3NP_001372398.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Related
    ENSP00000507808.1, ENST00000682118.1
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  4. NM_001385470.3NP_001372399.2  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  5. NM_001385471.1NP_001372400.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  6. NM_001385472.1NP_001372401.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  7. NM_001385473.1NP_001372402.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  8. NM_001385474.1NP_001372403.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  9. NM_001385475.1NP_001372404.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  10. NM_001385476.1NP_001372405.1  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)
  11. NM_001385477.1NP_001372406.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  12. NM_001385478.1NP_001372407.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  13. NM_001385479.1NP_001372408.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  14. NM_001385480.1NP_001372409.1  neuroblastoma breakpoint family member 11 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENSP00000477874.1, ENST00000613531.1
    Conserved Domains (1) summary
    pfam06758
    Location:607672
    DUF1220; Repeat of unknown function (DUF1220)
  15. NM_183372.9NP_899228.5  neuroblastoma breakpoint family member 11 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Consensus CDS
    CCDS41381.2
    UniProtKB/Swiss-Prot
    Q5RGN0
    Related
    ENSP00000477509.1, ENST00000615281.4
    Conserved Domains (2) summary
    COG0419
    Location:11401
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam06758
    Location:682747
    DUF1220; Repeat of unknown function (DUF1220)

RNA

  1. NR_046188.5 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
  2. NR_110864.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
    Related
    ENST00000614506.4
  3. NR_169628.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803
  4. NR_169629.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC239803

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    148102151..148152281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    146655132..146705256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)