U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Snord3a small nucleolar RNA, C/D box 3A [ Mus musculus (house mouse) ]

Gene ID: 19850, updated on 8-Nov-2022

Summary

Official Symbol
Snord3aprovided by MGI
Official Full Name
small nucleolar RNA, C/D box 3Aprovided by MGI
Primary source
MGI:MGI:97977
See related
Ensembl:ENSMUSG00000106147 AllianceGenome:MGI:97977
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rnu3a
Summary
Acts upstream of or within response to bacterium. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Snord3a in Genome Data Viewer
Location:
10; 10 B1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (40134464..40134675)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (40258468..40258679)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene ribosome production factor 2 homolog Neighboring gene general transcription factor IIIC, polypeptide 6, alpha Neighboring gene S-adenosylmethionine decarboxylase 1 Neighboring gene predicted gene 8948

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002842.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131684
    Related
    ENSMUST00000196710.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    40134464..40134675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)