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Prokr1 prokineticin receptor 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 192648, updated on 18-Sep-2018

Summary

Official Symbol
Prokr1provided by RGD
Official Full Name
prokineticin receptor 1provided by RGD
Primary source
RGD:708443
See related
Ensembl:ENSRNOG00000009556
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Gpr73
Summary
G protein-coupled receptor for prokineticin [RGD, Feb 2006]
Expression
Biased expression in Spleen (RPKM 34.3), Kidney (RPKM 7.2) and 4 other tissues See more
Orthologs

Genomic context

See Prokr1 in Genome Data Viewer
Location:
4q34
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (119375790..119386551, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 4 NC_005103.3 (183939201..183949822, complement)

Chromosome 4 - NC_005103.4Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 10 Neighboring gene Rho GTPase activating protein 25 Neighboring gene vomeronasal 1 receptor 101 Neighboring gene vomeronasal 1 receptor 102

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Pathways from BioSystems

General gene information

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
G protein-coupled receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
circadian rhythm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
prokineticin receptor 1
Names
G protein-coupled receptor 73
G protein-coupled receptor ZAQ
PK-R1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138977.1NP_620433.1  prokineticin receptor 1

    See identical proteins and their annotated locations for NP_620433.1

    Status: PROVISIONAL

    Source sequence(s)
    AY089974
    UniProtKB/Swiss-Prot
    Q8R416
    Conserved Domains (1) summary
    pfam00001
    Location:79338
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    119375790..119386551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006236821.3XP_006236883.1  prokineticin receptor 1 isoform X1

    See identical proteins and their annotated locations for XP_006236883.1

    UniProtKB/Swiss-Prot
    Q8R416
    Related
    ENSRNOP00000012913.1, ENSRNOT00000012913.3
    Conserved Domains (1) summary
    pfam00001
    Location:79338
    7tm_1; 7 transmembrane receptor (rhodopsin family)

Alternate Rn_Celera

Genomic

  1. AC_000072.1 Alternate Rn_Celera

    Range
    108992288..108999753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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