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CG5986 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 192506, updated on 26-Aug-2021

Summary

Official Symbol
CG5986provided by FlyBase
Primary source
FLYBASE:FBgn0043455
Locus tag
Dmel_CG5986
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BEST:LP03871; Dmel\CG5986
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Genomic context

See CG5986 in Genome Data Viewer
Location:
95D10-95D10; 3-82 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24047790..24049168)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19873512..19874890)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Methyltransferase like 3 Neighboring gene Mitochondrial Rho Neighboring gene spastin Neighboring gene Rox8 Neighboring gene Autophagy-related 6 Neighboring gene Phosphatidylserine decarboxylase

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of U2-type prespliceosome ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein
Names
CG5986-PA
CG5986-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    24047790..24049168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142950.2NP_651207.1  uncharacterized protein Dmel_CG5986, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651207.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VCE2
    Related
    FBpp0083920, FBtr0084535
    Conserved Domains (1) summary
    cl00155
    Location:58113
    UBQ; Ubiquitin-like proteins
  2. NM_001275970.1NP_001262899.1  uncharacterized protein Dmel_CG5986, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262899.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VCE2
    Related
    FBpp0302813, FBtr0321261
    Conserved Domains (1) summary
    cl00155
    Location:58113
    UBQ; Ubiquitin-like proteins
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