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cct7 chaperonin containing TCP1, subunit 7 (eta) [ Danio rerio (zebrafish) ]

Gene ID: 192324, updated on 14-Feb-2019

Summary

Official Symbol
cct7provided by ZNC
Official Full Name
chaperonin containing TCP1, subunit 7 (eta)provided by ZNC
Primary source
ZFIN:ZDB-GENE-020419-7
See related
Ensembl:ENSDARG00000007385
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fb38h02; fc05g05; chunp6934; wu:fb38h02; wu:fc05g05
Orthologs

Genomic context

See cct7 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (60148452..60156358, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (59843215..59851121, complement)
103 previous assembly Zv9 (GCF_000002035.4) 7 NC_007118.5 (60624250..60632156, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene ethanolamine-phosphate phospho-lyase Neighboring gene heat shock protein 12B Neighboring gene solute carrier family 8 member 4b Neighboring gene phospholipase C, beta 3 (phosphatidylinositol-specific)

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
protein folding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
chaperonin-containing T-complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
T-complex protein 1 subunit eta
Names
etID46398.12
etID46398.7
subunit 7

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173248.1NP_775355.1  T-complex protein 1 subunit eta

    See identical proteins and their annotated locations for NP_775355.1

    Status: PROVISIONAL

    Source sequence(s)
    AF506229
    UniProtKB/TrEMBL
    Q8JHG7
    Related
    ENSDARP00000003107.5, ENSDART00000006802.7
    Conserved Domains (2) summary
    cd03340
    Location:5525
    TCP1_eta; TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), ...
    TIGR02345
    Location:4525
    chap_CCT_eta; T-complex protein 1, eta subunit

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    60148452..60156358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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