Format

Send to:

Choose Destination

Ptma prothymosin alpha [ Mus musculus (house mouse) ]

Gene ID: 19231, updated on 6-Sep-2017
Official Symbol
Ptmaprovided by MGI
Official Full Name
prothymosin alphaprovided by MGI
Primary source
MGI:MGI:97803
See related
Ensembl:ENSMUSG00000026238 Vega:OTTMUSG00000048097
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Thym
Orthologs
Location:
1; 1 C5
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (86526736..86530698)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (88423311..88427273)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 41907 Neighboring gene ribosomal protein L30, pseudogene 6 Neighboring gene phosphodiesterase 6D, cGMP-specific, rod, delta Neighboring gene COP9 signalosome subunit 7B

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Epstein-Barr virus infection, organism-specific biosystem (from KEGG)
    Epstein-Barr virus infection, organism-specific biosystemEpstein-Barr virus (EBV) is a ubiquitous human herpesvirus that is associated with oncogenesis. EBV infection to primary human B lymphocytes leads to induction of EBV-specific HLA-restricted cytotoxi...
  • Epstein-Barr virus infection, conserved biosystem (from KEGG)
    Epstein-Barr virus infection, conserved biosystemEpstein-Barr virus (EBV) is a ubiquitous human herpesvirus that is associated with oncogenesis. EBV infection to primary human B lymphocytes leads to induction of EBV-specific HLA-restricted cytotoxi...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Clone Names

  • MGC102090, MGC103390

Gene Ontology Provided by MGI

Function Evidence Code Pubs
histone binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
histone exchange IDA
Inferred from Direct Assay
more info
PubMed 
histone exchange IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008972.2NP_032998.1  prothymosin alpha

    See identical proteins and their annotated locations for NP_032998.1

    Status: PROVISIONAL

    Source sequence(s)
    AC158132
    Consensus CDS
    CCDS35649.1
    UniProtKB/Swiss-Prot
    P26350
    UniProtKB/TrEMBL
    Q0VGU2
    Related
    ENSMUSP00000044188.8, OTTMUSP00000067446, ENSMUST00000045897.14, OTTMUST00000123572
    Conserved Domains (1) summary
    pfam03247
    Location:2110
    Prothymosin; Prothymosin/parathymosin family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

    Range
    86526736..86530698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center