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Bathy04g03520 Glycogenin-1 [ Bathycoccus prasinos ]

Gene ID: 19016378, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy04g03520
Gene description
Glycogenin-1
Locus tag
Bathy04g03520
Gene type
protein coding
RNA name
Glycogenin-1
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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See Bathy04g03520 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_024005.1 (682884..684371, complement)

Chromosome 4 - NC_024005.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene phosphoglycerate mutase Neighboring gene RNA-binding motif protein, X-linked 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024005.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Glycogenin-1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024005.1 Reference assembly

    Range
    682884..684371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007513492.1 → XP_007513554.1  Glycogenin-1 [Bathycoccus prasinos]

    See identical proteins and their annotated locations for XP_007513554.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8EDL5
    Conserved Domains (1) summary
    cl11394
    Location:195 → 453
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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