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PUNSTDRAFT_105992 glucoamylase [ Punctularia strigosozonata HHB-11173 SS5 ]

Gene ID: 18875990, updated on 2-Jan-2024

Summary

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Gene symbol
PUNSTDRAFT_105992
Gene description
glucoamylase
Locus tag
PUNSTDRAFT_105992
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Punctularia strigosozonata HHB-11173 SS5 (strain: HHB-11173 SS5)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Corticiales; Punctulariaceae; Punctularia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
13

NW_006767442.1Genomic Context describing neighboring genes Neighboring gene beta-lactamase/transpeptidase-like protein Neighboring gene beta-lactamase/transpeptidase-like protein Neighboring gene MFS general substrate transporter Neighboring gene thymidylate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767442.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Floudas D, et al. Science, 2012 Jun 29. PMID 22745431

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucan 1,4-alpha-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoamylase
XP_007386319.1
  • CAZy_ID 260626

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767442.1 Reference assembly

    Range
    1343496..1346001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007386257.1 → XP_007386319.1  glucoamylase [Punctularia strigosozonata HHB-11173 SS5]

    See identical proteins and their annotated locations for XP_007386319.1

    Status: PROVISIONAL

    Conserved Domains (2) summary
    cd05808
    Location:488 → 581
    CBM20_alpha_amylase; Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. This domain is found in several bacterial and fungal alpha-amylases including the maltopentaose-forming amylases (G5-amylases). Most alpha-amylases have, in addition to the ...
    pfam00723
    Location:33 → 451
    Glyco_hydro_15; Glycosyl hydrolases family 15
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases